G47385



Basic Information


Item Value
gene id G47385
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 5523070 ~ 5523975 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU63332
CAAAGGTTTTCAGTGAATTGATAAAATCAATAGAGTCACGTATATAAGAGGGAAGAGTGACCACTTCTGATTTAATGAAGTAGTCAACGTAAGCAGATATATTTTCTGTTAGGCTTCCAATCCCACTAACAATGGGTCTTCCCTTCAGAGGGATATCTAAACCCTTGTGTATTTTAGGGAGTGTGTAGATAACAGGGATCACTGGATGTTCAACCTTAAGAAACTCAAAGCCATTTTTGTCAAACTCTCCATTATTGAAGTGATGTTCTAGTTGGGAATGTACCTGAATCTTCAACCTATTAGTAGGATCAGAGGCTAATTTCTCATAGAATGTTAAATCACTAAgttgtctttttatttcattttcataatccAAAACATTTTGCAAGACAACAGCACCCCCCTTATCAGCAGGCCTAACCACAATCCTGTTATCCTTACTCAAATCCATTACagcttctctttcctctttagaCAAATTATTATACACTTTgtattctttcttcttttttaatagACCTTTTACATCATTCTCAACTAAACGGCAATACGTGTCAAGAGAAGCGTTGCGGTACTTTGGAGGAATGAATGTGGACCTTTTCTTGAAACGACTATAGGCCAAGCCACTAGGGGCAGAAGTGGCAGGCCCATGATCTTGGTCCAAAGGAGAATCACTCCTAGTTACATTGTCTCTCATATCAGAATGGAAAAATTCCCTCAATCTTAAATTTCGGAAAAACTTTTGGAAATCAATAATAGTCTCAAAGTCATTCGTGTGAGTGGTTGGAACAAAACTCAGTCCCTTACTTAAGGCTGACGTGCAAGCATCAGACAAAGTTTTTTCAGAGAGGTTAATTACCGTACTCTCCTGCTGGTCTGGTTGTGGGACTGCCAGCGTACTTTTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU63332 True 906 lncRNA 0.39 1 5523070 5523975

Neighbor


gene id symbol gene type direction distance location
LOC120558307 NA coding upstream 135810 5376303 ~ 5387260 (+)
LOC120558632 LOC101473708,LOC108431628,LOC107592856 coding upstream 936006 4431388 ~ 4587064 (+)
LOC120559099 NA coding upstream 1241544 4266875 ~ 4281526 (+)
LOC120558381 LOC100699862,LOC103374679,LOC104941073 coding upstream 1264499 4254640 ~ 4258571 (+)
LOC120559787 LOC103357833 coding upstream 1342734 4084694 ~ 4180336 (+)
npbwr2b LOC103358254,LOC104941021 coding downstream 223234 5747209 ~ 5750232 (+)
oprl1 oprl1 coding downstream 539875 6063850 ~ 6234843 (+)
LOC120559680 fam187b,LOC104965325,LOC102795245 coding downstream 738048 6262023 ~ 6272680 (+)
rgs19 LOC103373111 coding downstream 822133 6346108 ~ 6393502 (+)
sox18 LOC104941087,LOC103385144,LOC107094976,LOC100711530,LOC101485236 coding downstream 969594 6493569 ~ 6502180 (+)
G47369 NA non-coding upstream 166959 5355635 ~ 5356111 (+)
G47314 NA non-coding upstream 536291 4986281 ~ 4986779 (+)
G47310 NA non-coding upstream 553771 4968929 ~ 4969299 (+)
G47307 NA non-coding upstream 602240 4904149 ~ 4920830 (+)
G47308 NA non-coding upstream 608576 4904496 ~ 4914494 (+)
G47388 NA non-coding downstream 9026 5533001 ~ 5534512 (+)
G47393 NA non-coding downstream 74337 5598312 ~ 5598572 (+)
G47414 NA non-coding downstream 211529 5735504 ~ 5735733 (+)
G47421 NA non-coding downstream 227743 5751718 ~ 5752149 (+)
G47423 NA non-coding downstream 237894 5761869 ~ 5762081 (+)
LOC120559501 NA other upstream 747712 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 1657272 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 2008312 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 2218433 3279361 ~ 3304637 (+)
LOC120559392 NA other upstream 2234981 3146481 ~ 3288089 (+)
G47444 NA other downstream 675071 6199046 ~ 6200594 (+)
ccm2l ccm2l,LOC102778549 other downstream 1174018 6697993 ~ 6720932 (+)
G47903 LOC104965021 other downstream 2588466 8112441 ~ 8116228 (+)
pkig pkig other downstream 2818775 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 2954148 8478123 ~ 8497394 (+)

Expression



Co-expression Network