G47504


Basic Information

Item Value
gene id G47504
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 6646655 ~ 6721672 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63463
agatagagagagagagagaaactgactATATACAGGCTCAGTGGAGACTGGAAGACTCCtccactgtgaaaaaaagggatTTACACTTTGGAAAAATAGCTCACAAAAAAGCAAATTTCCCAATATtaagagaagagaagctggaCGTTCTCCTAGGAGAAAGGACAGCAGCTCCACACTGGCAGCTGAATATGTATCTGCCTGCCACAACCTGAGGGACTCACCACTATAAGATCCCAGCATTACACATTGGTTTAGTATCGTACAGTAATTATATTGTACAAAACTGTTAAGTATTATATTGAGttgtgtaattgttttgtaatgtagTGTGTTGTATAACGATCAGTGCAGCATAGAATCTAtgtgacacctactgtatgtatttaacatgtgatatgtactatatatgcattttctgtaaactgctttggtaacaacatgttttctttgttgattccaataaagcaaattaaattgaaagcaagatagagagatatatagagagagacagagagaaagagagagacagagagagagagatagagagagagagaaagccaaAGCTctcttaatttaatttaactcATTAAACACGAATGCAGTTTCTTCCGGGTATCATACAGTAAATGCACAgccaaattaaaaacatataaCTGCTGCTAAAATGAAAACGAAAATGCC
>TU63465
gagagagagacagagagagagagagagagaaactgactATATACAGGCTCAGTGGAGACTGGAAGACTCCtccactgtgaaaaaaagggatTTACACTTTGGAAAAATAGCTCACAAAAAAGCAAATTTCCCAATATtaagagaagagaagctggaCGTTCTCCTAGGAGAAAGGACAGCAGCTCCACACTGGCAGCTGAATATGTATCTGCCTGCCACAACCTGAGGGACTCACCACTATAAGATCCCAGCATTACACATTGGTTTAGTATCGTACAGTAATTATATTGTACAAAACTGTTAAGTATTATATTGAGttgtgtaattgttttgtaatgtagTGTGTTGTATAACGATCAGTGCAGCATAGAATCTAtgtgacacctactgtatgtatttaacatgtgatatgtactatatatgcattttctgtaaactgctttggtaacaacatgttttctttgttgattccaataaagcaaattaaattgaaagcaagatagagagatatatagagagagacagagagaaagagagagacagagagagagagatagagagagagagaaagccaaAGCTctcttaatttaatttaactcATTAAACACGAATGCAGTTTCTTCCGGGTATCATACAGTAAATGCACAgccaaattaaaaacatataaCTGCTGCTAAAATGAAAACGAAAATGCC

Function

GO:

id name namespace
GO:0072359 circulatory system development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63463 False 684 lncRNA 0.36 2 6646655 6721672
TU63465 True 695 lncRNA 0.37 2 6696577 6721672

Neighbor

gene id symbol gene type direction distance location
sox18 LOC104941087,LOC103385144,LOC107094976,LOC100711530,LOC101485236 coding upstream 144475 6493569 ~ 6502180 (+)
rgs19 LOC103373111 coding upstream 253153 6346108 ~ 6393502 (+)
LOC120559680 fam187b,LOC104965325,LOC102795245 coding upstream 373975 6262023 ~ 6272680 (+)
oprl1 oprl1 coding upstream 411812 6063850 ~ 6234843 (+)
npbwr2b LOC103358254,LOC104941021 coding upstream 896423 5747209 ~ 5750232 (+)
cables2b LOC101464377,LOC102312634,LOC102204736,LOC100701228 coding downstream 8030 6729702 ~ 6774102 (+)
LOC120558797 NA coding downstream 133505 6855177 ~ 6863948 (+)
LOC120558795 NA coding downstream 147907 6869579 ~ 6934548 (+)
LOC120558791 NA coding downstream 305405 7027077 ~ 7066173 (+)
LOC120558603 NA coding downstream 404952 7126624 ~ 7135842 (+)
G47482 NA non-coding upstream 218657 6427468 ~ 6427998 (+)
G47460 NA non-coding upstream 392081 6242925 ~ 6254574 (+)
G47441 NA non-coding upstream 409829 6236194 ~ 6236826 (+)
G47428 NA non-coding upstream 789657 5856565 ~ 5856998 (+)
G47423 NA non-coding upstream 884574 5761869 ~ 5762081 (+)
G47508 NA non-coding downstream 1067 6722739 ~ 6725198 (+)
G47516 NA non-coding downstream 111499 6833171 ~ 6915980 (+)
G47517 NA non-coding downstream 124376 6846048 ~ 7305481 (+)
LOC120558815 NA non-coding downstream 150021 6871693 ~ 6889136 (+)
G47522 NA non-coding downstream 152837 6874509 ~ 6875118 (+)
G47444 NA other upstream 446061 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 1871297 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 2780857 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 3131897 3448104 ~ 3514758 (+)
LOC120559414 NA other upstream 3342018 3279361 ~ 3304637 (+)
G47903 LOC104965021 other downstream 1390769 8112441 ~ 8116228 (+)
pkig pkig other downstream 1621078 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 1756451 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 1932740 8654412 ~ 8662891 (+)
G48077 NA other downstream 1958610 8680282 ~ 8687964 (+)

Expression


Co-expression Network