G47517


Basic Information

Item Value
gene id G47517
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 6846048 ~ 7305481 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63481
GGATCACAAGGGGAGACATTGATTTCAGTGAGAAGGTCCTTGATGAGAAATCCTTTATCAGCCATGACCTCATCGCCTTCCTCAAGTAGACACAGGATCCCTGATTCTCTTGTGATCTCCTTGTCAGATATCGAACCTGTATACAGGTCACTGACAAATGTGACTAAACCTGAGGGAGAGATGCCAACTAGGCCCTTAAAGGTGGTGTTACCTTTGTAGTGGGAGTAGATTTCAGAGTTGAGAACTTTTGAACTAGGTCTCTGCACGTGTATTTCTGTACAATCTAATATAACTCTTGTAAGTGGGAAAGTGCTTTGGAAACAAGGAGGCATGAGCTCGTTTACAGTTTCTCTCGAAGGCCAAATTGGAAGTGATCCTAACATGAATTGTAGATAGTTTGCCCAGGTTACAACAGACCCTGCTTACAGTTGAC

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU63481 True 433 lncRNA 0.43 2 6846048 7305481

Neighbor

gene id symbol gene type direction distance location
cables2b LOC101464377,LOC102312634,LOC102204736,LOC100701228 coding upstream 71946 6729702 ~ 6774102 (+)
xkr7 xkr7,LOC103148205 coding upstream 162137 6579186 ~ 6683911 (+)
sox18 LOC104941087,LOC103385144,LOC107094976,LOC100711530,LOC101485236 coding upstream 343868 6493569 ~ 6502180 (+)
rgs19 LOC103373111 coding upstream 452546 6346108 ~ 6393502 (+)
LOC120559680 fam187b,LOC104965325,LOC102795245 coding upstream 573368 6262023 ~ 6272680 (+)
LOC120558666 LOC100692487,LOC102794907,LOC102302796,LOC101487578 coding downstream 328399 7633880 ~ 7650645 (+)
LOC120558668 LOC101467015,LOC102195234,LOC101063096,LOC101170270 coding downstream 346592 7652073 ~ 7671014 (+)
lima1a NA coding downstream 425334 7730815 ~ 7764951 (+)
LOC120558968 LOC105935211,LOC103363443,LOC101066234,LOC106920718 coding downstream 460119 7765600 ~ 7773185 (+)
igfbp6b LOC103366149,LOC101464910,LOC100708122,LOC104966704 coding downstream 536665 7842146 ~ 7848434 (+)
G47508 NA non-coding upstream 120850 6722739 ~ 6725198 (+)
G47504 NA non-coding upstream 124376 6646655 ~ 6721672 (+)
G47503 NA non-coding upstream 157334 6632869 ~ 6688714 (+)
G47482 NA non-coding upstream 418050 6427468 ~ 6427998 (+)
G47460 NA non-coding upstream 591474 6242925 ~ 6254574 (+)
LOC120558808 NA non-coding downstream 4520 7310001 ~ 7313720 (+)
LOC120558816 NA non-coding downstream 8258 7313739 ~ 7316913 (+)
LOC120558807 NA non-coding downstream 88459 7393940 ~ 7395907 (+)
G47762 NA non-coding downstream 150994 7456475 ~ 7456739 (+)
G47768 NA non-coding downstream 162940 7468421 ~ 7469071 (+)
ccm2l ccm2l,LOC102778549 other upstream 125116 6697993 ~ 6720932 (+)
G47444 NA other upstream 645454 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 2070690 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 2980250 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 3331290 3448104 ~ 3514758 (+)
G47903 LOC104965021 other downstream 806960 8112441 ~ 8116228 (+)
pkig pkig other downstream 1037269 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 1172642 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 1348931 8654412 ~ 8662891 (+)
G48077 NA other downstream 1374801 8680282 ~ 8687964 (+)

Expression


Co-expression Network