G47531


Basic Information

Item Value
gene id G47531
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 6963692 ~ 6967671 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63509
CTAAAGTCATCACTGTAGCATACTGGAAAACACACTGAGTTTTGAGCATTTTCAAATTTTTAAGTATGCTTGTTTTGTATATAAGGCTATACATCATCGTGCCCCTCCCCCACTGAGTGACATCTTTCAAAGAATTGAGAGTGGTGGTAGTACAAAGGGGACTGTGTAATACCTTTTAGGCGCACCacatttggaaaaactgttTTGTCAGTAAAGGGAAATAAATATTGGAATAGCCTGCCCCCCACAATAAGGGACGTCCCACATACATCAGTTTTAAAACTCATTTCAAATTCTGGCTTTTAGAAAACCAAAGCTGCACTCACTTTTAACTGCCTCACACATTTCATTATGCGTGACAATCACATGTTCTGTTGTATTTTGTCTTGACTGTTGTTGTTAGTGTTTGTCTTGCCTCTCAAACTATGAGGGTGTTGCATGCTTgttactgtttttatgtttttctttttatgtgtcTGCTGAGGGACAATAGATGAAAATTAGCTATGTTGCTAACTCTAGCATATTTACATTGTGTACTGATGTCTGTTAATATGGACTGTCcctatctaaataaataaataaataaaaatagatatttttttgttattttagtgATTCATTTCTAAAGAGTGTACTTACAAATGCAGCCAACAGTCCACTGGCCAAACAGAGCAACAAAGCAAACCGAAAGACTGATGCCATCTGTGGAAAGAAGTTAAACAAAGTCAACAAACTGCAAACAAGTAAATAATGTCAGACAATGAATGACTGCAACTGATCATTAATGAGACATTCATCAAATTAAAGCATCCTGTTAGTTACAAGTGTGATATAGATATGGTTTATATTTGATAGATTATCTAATAATTAAAATATCTAATTATTAAAAACACCAAGTTTTCTTAAAATAGAAAATGTCCTTTCGATTAATACAGGATTAGTTATTAAAAATAGATGAAACTGTGATAATGAATCATAATTACCTTTGCTGAGGTGGTGATTGGCTGAAACAAAGGAGAAGAACAAGCTGATGACAAGAAAATGTCTTTATATAGTTTATCATAGCACCGTGGCATCTGAAATATGGAAACCTGAcatgtttgaaatgtttttatatgtaaAGGTACAAGAAAACACCTGTCTAATTTATATGAGagcatgttttgtgttgcatgagagtatgtgttgagagatgcttattttctgtattttgtgttgtctttgtaaagctgcggaatggacagagtccaaaacTAATTTCCCTTCGGGGACAAGTCCTCTCAATAAAGACAGGGTTAGttattattaaaagtaaaattagaTGAAACTGTGATAACAAATTGAAATATAAATACCTttgctgagaaggtgattggctgacacagagaagaaaaaacagGCTGATGGCTGTCACTGAAAGAAAATGCCGCAGATCTGAATACTATTAAACATTCAATAATAACAAATTAGGTTAAACTCATCTTGATTTACTAATGCATCCACAATCTGTATTTAATTTTCTGCAATCTATTATAAACCAAATATATTAAACTTTCAGGCAAAACATTGATTGGTAATGATAACATTACAGGTTAATAGCTATTATACTCACATCAATACTCTTTGTTCTGCCTGGTTTGGTTTGGAAGAGAGTCACAGGCCCTTATATACATTGGAAAGGGGAGTGGTCTTAGTCATGACTAACAGTCCAGTGTCCAACAGAACATCCCCCAAAACTGACTGACTTTGCTTCAGCATTTGTTTCTTTTACACATAGCCACAAAACAGGCACGCACTTCTCATTCGACAACCCGGAAGCCAACATAAGGTCAAATGATGTTCGGGAACTGCTAGCTCCACCTTATTTATCTAAGCTTATTACACAATTTTTACCGGCAGTCCGGCACACACTCTCTGCTCTCTCATTCCCCTAGTAAACAAAAAATCTGTTTGTTAAAGAGCCTTGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63509 True 1972 lncRNA 0.35 2 6963692 6967671

Neighbor

gene id symbol gene type direction distance location
LOC120558795 NA coding upstream 29144 6869579 ~ 6934548 (+)
LOC120558797 NA coding upstream 99744 6855177 ~ 6863948 (+)
cables2b LOC101464377,LOC102312634,LOC102204736,LOC100701228 coding upstream 189590 6729702 ~ 6774102 (+)
xkr7 xkr7,LOC103148205 coding upstream 279781 6579186 ~ 6683911 (+)
sox18 LOC104941087,LOC103385144,LOC107094976,LOC100711530,LOC101485236 coding upstream 461512 6493569 ~ 6502180 (+)
LOC120558791 NA coding downstream 59406 7027077 ~ 7066173 (+)
LOC120558603 NA coding downstream 158953 7126624 ~ 7135842 (+)
LOC120558799 NA coding downstream 176117 7143788 ~ 7149386 (+)
LOC120558604 NA coding downstream 204690 7172361 ~ 7180197 (+)
LOC120558794 NA coding downstream 294031 7261702 ~ 7266435 (+)
G47516 NA non-coding upstream 47712 6833171 ~ 6915980 (+)
LOC120558815 NA non-coding upstream 74556 6871693 ~ 6889136 (+)
G47522 NA non-coding upstream 88574 6874509 ~ 6875118 (+)
G47508 NA non-coding upstream 238494 6722739 ~ 6725198 (+)
G47504 NA non-coding upstream 242020 6646655 ~ 6721672 (+)
LOC120558804 NA non-coding downstream 11885 6979556 ~ 6981039 (+)
G47536 NA non-coding downstream 13744 6981415 ~ 7138886 (+)
LOC120558806 NA non-coding downstream 23064 6990735 ~ 6993172 (+)
LOC120558814 NA non-coding downstream 32880 7000551 ~ 7001713 (+)
G47543 NA non-coding downstream 94396 7062067 ~ 7063606 (+)
ccm2l ccm2l,LOC102778549 other upstream 242760 6697993 ~ 6720932 (+)
G47444 NA other upstream 763098 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 2188334 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 3097894 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 3448934 3448104 ~ 3514758 (+)
G47903 LOC104965021 other downstream 1144770 8112441 ~ 8116228 (+)
pkig pkig other downstream 1375079 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 1510452 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 1686741 8654412 ~ 8662891 (+)
G48077 NA other downstream 1712611 8680282 ~ 8687964 (+)

Expression


Co-expression Network