G47768


Basic Information

Item Value
gene id G47768
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 7468421 ~ 7469071 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63784
GTCTTCTGCACTGTATCATATGTTATACATTCTTAATCTGTAAACTAACtccagctgtcagatgaatgtagatgTGTAAAAAgtatatttccctctgaggcATAAAATTATGGAGCCCCTAAAGGGACATGTGGGAGAAAAAATATTCTGCTGCGCACGATTAACTTTCTGGTGCGCACATGAAACCAATCTGAGTAGTCAGAATGGCTGGCGAGGAGGAGGTATTCATCTTCCTGAAAATGCAACAAAATGTATGGtgttgttttaagcccccaacgtcgtcttccaggcagcgctgcctggaaggcactaggattaggcaatggttagggttagggttaggtgccttgaagtcgacagtCGCAGCattgccttgaagtcgacgttgggtgcttaaaacaccatcgagcaaaATGGACCTGATAGATGATAAGGTAACTGTCAACTGATTTCATGCTGTGAATGTGaactgtgtgtgtaaatgtatacacacacagttcaaTGTGTAACTTTAGCCCCATAATGTTAGCAGTACTTTGTTAGCATACATTTTGCTAGACTTAGATTGGTTTCTTGTGAGCACGAAATACTTTTGTGTGCGCACCTGTAAGTTTCTCGCgcgcaagaaaaaaaaagtcatgtcaTGTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63784 True 651 lncRNA 0.43 1 7468421 7469071

Neighbor

gene id symbol gene type direction distance location
LOC120558796 NA coding upstream 189413 7271418 ~ 7279008 (+)
LOC120558794 NA coding upstream 201986 7261702 ~ 7266435 (+)
LOC120558604 NA coding upstream 288224 7172361 ~ 7180197 (+)
LOC120558799 NA coding upstream 319035 7143788 ~ 7149386 (+)
LOC120558603 NA coding upstream 332579 7126624 ~ 7135842 (+)
LOC120558666 LOC100692487,LOC102794907,LOC102302796,LOC101487578 coding downstream 164809 7633880 ~ 7650645 (+)
LOC120558668 LOC101467015,LOC102195234,LOC101063096,LOC101170270 coding downstream 183002 7652073 ~ 7671014 (+)
lima1a NA coding downstream 261744 7730815 ~ 7764951 (+)
LOC120558968 LOC105935211,LOC103363443,LOC101066234,LOC106920718 coding downstream 296529 7765600 ~ 7773185 (+)
igfbp6b LOC103366149,LOC101464910,LOC100708122,LOC104966704 coding downstream 373075 7842146 ~ 7848434 (+)
G47762 NA non-coding upstream 11682 7456475 ~ 7456739 (+)
LOC120558807 NA non-coding upstream 72514 7393940 ~ 7395907 (+)
LOC120558816 NA non-coding upstream 151508 7313739 ~ 7316913 (+)
LOC120558808 NA non-coding upstream 154701 7310001 ~ 7313720 (+)
LOC120558803 NA non-coding upstream 216169 7161017 ~ 7252252 (+)
G47789 NA non-coding downstream 115592 7584663 ~ 7585957 (+)
G47794 NA non-coding downstream 134028 7603099 ~ 7603554 (+)
G47786 NA non-coding downstream 138819 7607890 ~ 7702736 (+)
G47798 fam120c non-coding downstream 148169 7617240 ~ 7620089 (+)
G47881 agap2 non-coding downstream 373423 7842494 ~ 7902442 (+)
ccm2l ccm2l,LOC102778549 other upstream 747489 6697993 ~ 6720932 (+)
G47444 NA other upstream 1267827 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 2693063 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 3602623 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 3953663 3448104 ~ 3514758 (+)
G47903 LOC104965021 other downstream 643370 8112441 ~ 8116228 (+)
pkig pkig other downstream 873679 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 1009052 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 1185341 8654412 ~ 8662891 (+)
G48077 NA other downstream 1211211 8680282 ~ 8687964 (+)

Expression


Co-expression Network