G47903 (LOC104965021)


Basic Information

Item Value
gene id G47903
gene name LOC104965021
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8112441 ~ 8116228 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU63965
CTTTAATTGAGAATAAAGCAACCACATTATATCAAAAAGAACAGTGTTCACATATGTTTTaactaaaaacaaataaaaccccaaaacatttcatttccagACCTGAGTGTCACTAAAAACACCAAGacgtgaaaaaaaagaaaaacatgaaactTATTGTAGCTATGTAATTTTGCATTGTTAGGTTGCATGAGTGTCTTCCATTATTCTGAcatgtgatttatttttgaaatgcttgtcctttttttatttttgactttCCTCACAGCATAAAGTTAATACTTAAATTGGAAGATGTGTGCATCTCCAATAAGATCATTTTCAAAAATGGAAATATCTATTTTTAATAGTCTAACCATTAGACATGTAACACTTTGTCATTTGCATTGTAGGCAAACCTACTGAGATAAATATTCAGTGCATTTACTGTTTCCCTGTTAACAACCAAAAGTTGAATAACCAATAAAACCTCTGCCGCCTGAGCAAAGAGCCTGCACTCTTCCCAGCTCACCTTCCACAACGAGGGAACAATAAATCTTCACAAAGAACTTTGTTTTTACATATCAAAACCACGTGAGCTTAGTAGGAATTAAATGTACAAATGATACCCAATTTTTCTCGCCAACAAGTGGCACCCCTTCCGCTATATTTAACACAAATGAATCATTCATTTAAGTCAATTAAGAGAGTATTATACGTTATACTCGGGACCCTTCAGTGGATGTATGCTGACAACCTGCTTGCCTGTGTGATTTCCACAACTAAAGAACACATGCAAACATTTCTGATGAATCATGGCGCGTGTTTGGACTATAAACAACCTGAAGCTGAATTATCCACTGTTATTGTTCGAAAGGTACGAAGTCAAAAAGACAGATTTTACATGATTAAAATCAGACCAGCATGAGTTGACAGACGTACAACAGGGGCTTACACATTTTTCAAACATCCCCAAAAAGGGAAAGACGATCGTTGAAGACGGACAGATGGCATTTGATTAGACTTTGATATAGTGTATTGTGAATACTTTTATTGTAGATTGTGCTCAATATGGTCGCCACAAAGTGATCTCACCCGGCAGTTTCAGGGCGCTGCCGATGCCAACGCGGCAAATGTTGTCCATCCATATATTCTGCCTACTTCTTTTCTTTGCGTTTAAGCCATAAAAAAAGACTTGCCCTCCAGAGGAAATTGATGAACAAGTGACAAATTACATGACATTAAAAACGCACATTTCTTCTCTAGagggatttttttgttgttaattcCTTCATTTTGACCATGTAGATATGTGTGAACTCTTTGAACCCTTTGAATAGATGTATATCCTTGGTATTAACTTTGTCCATTAGTGTAATCATTTGAGAACTGAATATGAATATTTTACAACCATTTAAAACAATGACTGCAACactcaaaatcaaaaaaaaagaaaaaaaaaaagaaaagtacaagCTTACTTAATTTacaacttctttttttgttgaaatttttcataacaaaatgtaaaaaatatttcatgtttgttttaaaacattttacagtCTTTGTACAAGTTCATCAAATAATGAAGGAAATACATTTGATAAATACCAGGGCTGGGCTCACTCACCTATTTATTCTTTTAGGTTATGGctgttatatataaaaaaaaaaaaaaaaaaaggaggaaaatatttcaaaagaaaaattagacaaaaatattgaaaagatGGCTTTAGAGACATGCACTCTCAAACTAGCCTGTACAGTCTTGATGAAGAAATATCCCTCTgccaaaaacctttaaaaaaaagggtacAAAAAGGGactatgttttttcatttttttcttttttaaaagcattcaattaataaataacatactataaaaacattataaaaaaaaaaaaaaaaaaaaaatcggtaAGAAGACCTAAAAAGGTATGTGATGGAAATCTTTGTTTCCTCATGATTTCAAGACAGCGATGCTAAAATGACCAGGTCCCATCATCACATTTCATTTGAGTAAAACAGAAGAGCAAAAGATATTATCTACACTTTCCtgtattccccccccccacaaacacatttcacaaGCTTTTAAAGCCTCTCATTATTGCCccacaaatgtaaaaaataaagaaaaaaggttGCAAACTCATTTATCTCACCAGTACATTTCATTGCTGTCACGCTGAAGCCTGTAAAAAAATAGTTGGGctagtttaaaaacaaaaacaacaacattataCAATACTTTATGTAACAAGATGGATGTCCGGGATGTCAAGTACAATGTGTATAATGTGTCTTCTGATGACGATCCTATTTGGGTAACGGCGGCAGTGGGGGAGGCGGTTCTGAAGGGAGGGGCGGGGGCCTGGAGTTGCTCCCTCTGGAGCCGCCGCTGTAGCGGTACTCCCCGTATTGGGATCTGTAGTCAAACATGGACGGCTGGGACGGCTGGACCCCCTGCGCGCTCAGAAGCGAGTTCAGCATTTCAAACGTGTCCTGGTACTCGTTTGACTGGGCCCCGCCGGCCGCGCCGTGCCCGTTAGTGTCCGTCTTGTCGCCCTTGGAGTGCGGATAGATCCctgggtggtgggggaggccCAGGGCGGGGAGAATGTCAGGGCCGTGGCCCAGAGTTTgcccagaggaggaagagagggacgGCAGCTGGTAGGGATTCCTGGAGGACTTGCTGGCTTTAGAGGCAGGGTGGGGGCCTGCCGTGGGCTCTTGGGAGTGCGTCCGCTTGCGCGACGCGGACGACGACGACGAAGAGCTGGTTCTAGAAGAGTCGCTGGGGACTTTTTTGCTGCCTCCGACAGCCCCACTGGAGCCAGACGAATGTTTGTGCGAAGAGGAGAGCGAGGCACCCGTGGAGGAGgaatggtggtggtggtggtgatggtggtggttaGACCGCTCCCTGTGCTTGTCCCTGCTCTTGCCCTCCTCTCCCGAACTCCCCCTTTGCTTCTCAGGCACTCGTATTCGGACTTTGATGTCCTGTTCCTGACCTCGGGCGCCGCCACTATGGCCGCCGCCGCCTCCCCCAGCTAGGGGTAAGCGCATTTTGAGAGAGGTCCTCTCGTGCCTCTCCTTCTCCAGGGGGATTTTCAGAATTATGGGCGACGGGTtgtcggaggaggaggagctggacTGCTGGTGGTGATGCGGCTGCTTCTccttcctctgctgctgctgaccaATGAGAGCCTGGGCGGCGTTGGCGTAGTCCCTCTTCACGCTGGCCTCCATGTTCTCGAGCTTCCTCTTCTGGGCAGCCAGGACGTCGGCGTTCTTGGCCCGGTACTCGCTCAGCGACACCTTAGCTGGGACGTGAACGTCGTTGGGCTGCTGCTCGGTTCCGGCCTGGCCTTTGCCACTCCAAGTCGCGGCGCTGCCAGACTCCCCCCGGTCCTTGTCGCCGacggacgaggaggaggaggcggcggAAGGCGGAGCAGAGAGGCTCATCAAGCCTGCCACGGTGCTCTCCGACGAGGCCATGGAGATCATGCTCATCATGGTGTCCCTCTGGTCCCCCTCCTCCTGGACTTTTGGCTTGGCTTTTGGGGTCTGCCCTCCAGCTTCCAGTTGCGAATCCGTTTCAACCGGCTGGGTGTTTTCTCCAGAATCTGCAGGAACTCGTGTGTGAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63965 True 3649 TUCP 0.44 2 8112441 8116228

Neighbor

gene id symbol gene type direction distance location
tegt tmbim6,LOC102798441 coding upstream 67943 8036457 ~ 8044498 (+)
ctdsp2 ctdsp2 coding upstream 77606 8024957 ~ 8034835 (+)
LOC120558977 LOC100690878,LOC102309473,LOC101468225,LOC102214722 coding upstream 93275 7997021 ~ 8019166 (+)
march9 march9,LOC107088728,LOC105930772,LOC103366154,LOC106527634 coding upstream 120761 7969514 ~ 7991680 (+)
tspan31 tspan31 coding upstream 157184 7945500 ~ 7955257 (+)
pmelb pmel,LOC102311125 coding downstream 17807 8134035 ~ 8146440 (+)
LOC120558990 LOC105941124,LOC105016959,LOC106920718,LOC106934618 coding downstream 68008 8184236 ~ 8187549 (+)
gdap1l1 gdap1l1,LOC102776784 coding downstream 105810 8222038 ~ 8247005 (+)
r3hdml r3hdml coding downstream 156418 8272646 ~ 8280546 (+)
hnf4a hnf4a coding downstream 174567 8290795 ~ 8316864 (+)
G47881 agap2 non-coding upstream 209999 7842494 ~ 7902442 (+)
G47786 NA non-coding upstream 409705 7607890 ~ 7702736 (+)
G47798 fam120c non-coding upstream 492352 7617240 ~ 7620089 (+)
G47794 NA non-coding upstream 508887 7603099 ~ 7603554 (+)
G47789 NA non-coding upstream 526484 7584663 ~ 7585957 (+)
G47909 NA non-coding downstream 152 8116380 ~ 8117222 (+)
G48002 NA non-coding downstream 216294 8332522 ~ 8333531 (+)
G48017 NA non-coding downstream 264859 8381087 ~ 8381428 (+)
G48018 NA non-coding downstream 265263 8381491 ~ 8381729 (+)
G48039 NA non-coding downstream 331879 8448107 ~ 8448314 (+)
ccm2l ccm2l,LOC102778549 other upstream 1391509 6697993 ~ 6720932 (+)
G47444 NA other upstream 1911847 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 3337083 4772932 ~ 4775358 (+)
gpr173 LOC104932793,LOC101475032,LOC100694027,LOC104957049 other upstream 4246643 3843064 ~ 3865798 (+)
LOC120559404 NA other upstream 4597683 3448104 ~ 3514758 (+)
pkig pkig other downstream 226522 8342750 ~ 8380578 (+)
LOC120559763 NA other downstream 361895 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 538184 8654412 ~ 8662891 (+)
G48077 NA other downstream 564054 8680282 ~ 8687964 (+)
G48162 NA other downstream 600539 8716767 ~ 8726552 (+)

Expression


Co-expression Network