G48018


Basic Information

Item Value
gene id G48018
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8381491 ~ 8381729 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64130
gaaataactgaaaacatgtcttatattttagattcttcaaagtagtcaccctttgcttttttattaataagggaaaaacttccactaattaaccctgacaaggcacacctgtgaagtgaaaaccatttcaggtgactacctcatgaagctcattgagagaacaccaagggtttgcagagttatcaaaaaaagcaaagggtggctactttgaggaatctaaaatataagacatgttttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64130 True 239 lncRNA 0.35 1 8381491 8381729

Neighbor

gene id symbol gene type direction distance location
ttpal ttpal coding upstream 50177 8318835 ~ 8331314 (+)
hnf4a hnf4a coding upstream 64627 8290795 ~ 8316864 (+)
r3hdml r3hdml coding upstream 100945 8272646 ~ 8280546 (+)
gdap1l1 gdap1l1,LOC102776784 coding upstream 134486 8222038 ~ 8247005 (+)
LOC120558990 LOC105941124,LOC105016959,LOC106920718,LOC106934618 coding upstream 193942 8184236 ~ 8187549 (+)
LOC120559876 NA coding downstream 52164 8433893 ~ 8437384 (+)
ccn5 wisp2 coding downstream 55648 8437377 ~ 8444483 (+)
LOC120559919 NA coding downstream 68327 8450056 ~ 8463093 (+)
LOC120559921 NA coding downstream 73426 8455155 ~ 8456435 (+)
LOC120559920 NA coding downstream 84247 8465976 ~ 8467001 (+)
G48017 NA non-coding upstream 63 8381087 ~ 8381428 (+)
G48002 NA non-coding upstream 47960 8332522 ~ 8333531 (+)
G47909 NA non-coding upstream 264269 8116380 ~ 8117222 (+)
G47881 agap2 non-coding upstream 479049 7842494 ~ 7902442 (+)
G47786 NA non-coding upstream 678755 7607890 ~ 7702736 (+)
G48039 NA non-coding downstream 66378 8448107 ~ 8448314 (+)
G48063 NA non-coding downstream 150867 8532596 ~ 8532801 (+)
G48075 NA non-coding downstream 292744 8674473 ~ 8677331 (+)
G48079 camk1g,LOC102780232,LOC102204221,LOC101478990,LOC103361639 non-coding downstream 308974 8690703 ~ 8700088 (+)
G48158 NA non-coding downstream 332590 8714319 ~ 8714568 (+)
pkig pkig other upstream 913 8342750 ~ 8380578 (+)
G47903 LOC104965021 other upstream 265263 8112441 ~ 8116228 (+)
ccm2l ccm2l,LOC102778549 other upstream 1660559 6697993 ~ 6720932 (+)
G47444 NA other upstream 2180897 6199046 ~ 6200594 (+)
LOC120559501 NA other upstream 3606133 4772932 ~ 4775358 (+)
LOC120559763 NA other downstream 96394 8478123 ~ 8497394 (+)
LOC120559293 pifo other downstream 272683 8654412 ~ 8662891 (+)
G48077 NA other downstream 298553 8680282 ~ 8687964 (+)
G48162 NA other downstream 335038 8716767 ~ 8726552 (+)
LOC120559255 tshz2 other downstream 608758 8990487 ~ 9121912 (+)

Expression


Co-expression Network