G48077


Basic Information

Item Value
gene id G48077
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8680282 ~ 8687964 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64205
cgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgccagcgtgcgtgtgtgcgcttctgtgtgtgtgtgcttctgtgtggTTGTCGGGAAGCTTTATAGGCACTctttccaaaaataaaaaaaaaagtcccactGACTGTATGGACCTCGCAGACCATCTGGGCCCGTCAGAGGATCAACCACTTGTCATTCCCAgtactggggggggggggggggggggggggggggcctgcCGACACAAAACAGCTCCACGCTGAGTCAGCACAGCCACACTGACCAAGTAAAATGCTTCCACCTAAACTTCCTGAAGCCTTCACATGACTGAGCACACTCTGGTCTGTGCAGCCTTGCTGTTACAGGTTTTACCATACCCGTTGAGGTTGGCGGGCTCTGAGTGGTAGATGTTCTTGCCCTGCTCAGCCATAGAGGGGGCGTGATGTGGGACGGCCTGACTCTGAGTGGTCTTCAGTGTGTGATAATGGCTCTTTGCGTCCACGGGACTCGCGGGCAGGGACATGTGATGCGTCCCGTTTACTGTGCCGTTGATCCCCGGCAGCTTGGGGTCCAGTTTGTCGGGATCGAGACGTGTGTGGCTTTTCTTCGGGGAGGACAAGTCGACCACTTTGATGTCTGGGATACTGGGCTGCCTCGCGGCCAGCTGCAGCTTCTTCATGTGGCTGATGGCTACTGCAGCGTTATAGGCTTGCTTCCACTTGGACTTGGCAAAGTTCTTTTGGATCTGAACACTGACGGAATAGTAGATGTCCTGACTCCGGGCCGTCTCTCCGATAATCCAGGGATGTCTGAGCGCCAGGTCAGTGGAGTAGCGCATGCTGGGATTCTTCTGCATCATGTTACGGATGAAAT
>TU64206
cgagcaacaaacaaacatatcagAAAAGATTATACCAGTATGGCTTATTTGAACCAAGCATGCAGGTTTTCCATACATTTCATTGTGTTTATGGAGGTTTGCTAaagaataatattataatataaatcaTAAAGAATAACACATGAAGTACAATAATTGCCTTATTGcattgtgtgtattttcttaaacGTGTAACCACAGTCCTAATAAACCTGGACACTAAGTGTGCGCTGATGAATCAAACTCTccctgataaaaaaaataagaagaaaaacaggaataatataaaataattataattataattataattataaaagccttgatgacatcagagggcCGGGGCTGCTTCACACTGAATTAGCTGGACATTCAGCAGCAGCAATACTGGCTCATGtagcctgtttcacaaaagtcTACCCTGTGCATCTGAGTTAAAGTGAGTCTTGCATCtgaaagttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgtgccagcgtgcgtgtgtgcgcttctgtgtgtgtgtgcttctgtgtggTTGTCGGGAAGCTTTATAGGCACTctttccaaaaataaaaaaaaaagtcccactGACTGTATGGACCTCGCAGACCATCTGGGCCCGTCAGAGGATCAACCACTTGTCATTCCCAgtactggggggggggggggggggggggggggggcctgcCGACACAAAACAGCTCCACGCTGAGTCAGCACAGCCACACTGACCAAGTAAAATGCTTCCACCTAAACTTCCTGAAGCCTTCACATGACTGAGCACACTCTGGTCTGTGCAGCCTTGCTGTTACAGGTTTTACCATACCCGTTGAGGTTGGCGGGCTCTGAGTGGTAGATGTTCTTGCCCTGCTCAGCCATAGAGGGGGCGTGATGTGGGACGGCCTGACTCTGAGTGGTCTTCAGTGTGTGATAATGGCTCTTTGCGTCCACGGGACTCGCGGGCAGGGACATGTGATGCGTCCCGTTTACTGTGCCGTTGATCCCCGGCAGCTTGGGGTCCAGTTTGTCGGGATCGAGACGTGTGTGGCTTTTCTTCGGGGAGGACAAGTCGACCACTTTGATGTCTGGGATACTGGGCTGCCTCGCGGCCAGCTGCAGCTTCTTCATGTGGCTGATGGCTACTGCAGCGTTATAGGCTTGCTTCCACTTGGACTTGGCAAAGTTCTTTTGGATCTGAACACTGACGGAATAGTAGATGTCCTGACTCCGGGCCGTCTCTCCGATAATCCAGGGATGTCTGAGCGCCAGGTCAGTGGAGTAGCGCATGCTGGGATTCTTCTGCATCATGTTACGGATGAAAT
>TU64207
CTAAGGTGTTACTTGAACCTACCAAGTAAAATGCTTCCACCTAAACTTCCTGAAGCCTTCACATGACTGAGCACACTCTGGTCTGTGCAGCCTTGCTGTTACAGGTTTTACCATACCCGTTGAGGTTGGCGGGCTCTGAGTGGTAGATGTTCTTGCCCTGCTCAGCCATAGAGGGGGCGTGATGTGGGACGGCCTGACTCTGAGTGGTCTTCAGTGTGTGATAATGGCTCTTTGCGTCCACGGGACTCGCGGGCAGGGACATGTGATGCGTCCCGTTTACTGTGCCGTTGATCCCCGGCAGCTTGGGGTCCAGTTTGTCGGGATCGAGACGTGTGTGGCTTTTCTTCGGGGAGGACAAGTCGACCACTTTGATGTCTGGGATACTGGGCTGCCTCGCGGCCAGCTGCAGCTTCTTCATGTGGCTGATGGCTACTGCAGCGTTATAGGCTTGCTTCCACTTGGACTTGGCAAAGTTCTTTTGGATCTGAACACTGACGGAATAGTAGATGTCCTGACTCCGGGCCGTCTCTCCGATAATCCAGGGATGTCTGAGCGCCAGGTCAGTGGAGTAGCGCATGCTGGGATTCTTCTGCATCATGTTACGGATGAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64205 False 926 TUCP 0.55 6 8680282 8687964
TU64206 True 1328 TUCP 0.48 6 8681925 8687964
TU64207 False 612 TUCP 0.54 4 8684798 8687964

Neighbor

gene id symbol gene type direction distance location
LOC120559286 NA coding upstream 25966 8645778 ~ 8654316 (+)
itih6 itih6 coding upstream 47457 8605863 ~ 8632825 (+)
LOC120559284 pfkfb1,LOC100700435,LOC101066702 coding upstream 74524 8562053 ~ 8605758 (+)
LOC120559288 NA coding upstream 109951 8569081 ~ 8570331 (+)
LOC120559290 NA coding upstream 119199 8558038 ~ 8561083 (+)
pfdn4 pfdn4 coding downstream 512788 9200752 ~ 9210559 (+)
LOC120558451 LOC100703402 coding downstream 546196 9234160 ~ 9236016 (+)
cd40 NA coding downstream 670008 9357972 ~ 9366078 (+)
zbtb48 LOC102780700 coding downstream 847443 9535407 ~ 9544237 (+)
syt6a syt6,LOC103150978,LOC106928401,LOC103467834 coding downstream 909662 9597626 ~ 9689330 (+)
G48075 NA non-coding upstream 2951 8674473 ~ 8677331 (+)
G48063 NA non-coding upstream 147481 8532596 ~ 8532801 (+)
G48039 NA non-coding upstream 231968 8448107 ~ 8448314 (+)
G48018 NA non-coding upstream 298553 8381491 ~ 8381729 (+)
G48017 NA non-coding upstream 298854 8381087 ~ 8381428 (+)
G48079 camk1g,LOC102780232,LOC102204221,LOC101478990,LOC103361639 non-coding downstream 2739 8690703 ~ 8700088 (+)
G48158 NA non-coding downstream 26355 8714319 ~ 8714568 (+)
G48160 NA non-coding downstream 27923 8715887 ~ 8716184 (+)
G48176 NA non-coding downstream 55670 8743634 ~ 8747729 (+)
G48205 NA non-coding downstream 138494 8826458 ~ 8826676 (+)
LOC120559293 pifo other upstream 17391 8654412 ~ 8662891 (+)
LOC120559763 NA other upstream 182888 8478123 ~ 8497394 (+)
pkig pkig other upstream 299704 8342750 ~ 8380578 (+)
G47903 LOC104965021 other upstream 564054 8112441 ~ 8116228 (+)
ccm2l ccm2l,LOC102778549 other upstream 1959350 6697993 ~ 6720932 (+)
G48162 NA other downstream 28803 8716767 ~ 8726552 (+)
LOC120559255 tshz2 other downstream 302523 8990487 ~ 9121912 (+)
G48347 NA other downstream 716260 9404224 ~ 9429947 (+)
ubxn10 NA other downstream 1234636 9922600 ~ 9925081 (+)
agmat agmat,LOC102790280 other downstream 1451634 10139598 ~ 10151251 (+)

Expression


Co-expression Network