G48158


Basic Information

Item Value
gene id G48158
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8714319 ~ 8714568 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64300
atggacccacgtttgtatcttgtaagttaccccactaataatgcccgaaatgataccaaacgtctacaagtagtacaaataggttatgctctcataaaacgatggattggaaagtttgtaagtacaccagaagtttatgaacacttgcctgctctcttcagctctctgttgctgctgctgctgctgctacctgcagttagacgagtgcttagggccgtctacaaattactacaccgaaaagagatacaac

Function

NR:

description
PREDICTED: atlastin-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64300 True 250 lncRNA 0.43 1 8714319 8714568

Neighbor

gene id symbol gene type direction distance location
LOC120559286 NA coding upstream 60003 8645778 ~ 8654316 (+)
itih6 itih6 coding upstream 81494 8605863 ~ 8632825 (+)
LOC120559284 pfkfb1,LOC100700435,LOC101066702 coding upstream 108561 8562053 ~ 8605758 (+)
LOC120559288 NA coding upstream 143988 8569081 ~ 8570331 (+)
LOC120559290 NA coding upstream 153236 8558038 ~ 8561083 (+)
pfdn4 pfdn4 coding downstream 486184 9200752 ~ 9210559 (+)
LOC120558451 LOC100703402 coding downstream 519592 9234160 ~ 9236016 (+)
cd40 NA coding downstream 643404 9357972 ~ 9366078 (+)
zbtb48 LOC102780700 coding downstream 820839 9535407 ~ 9544237 (+)
syt6a syt6,LOC103150978,LOC106928401,LOC103467834 coding downstream 883058 9597626 ~ 9689330 (+)
G48079 camk1g,LOC102780232,LOC102204221,LOC101478990,LOC103361639 non-coding upstream 14231 8690703 ~ 8700088 (+)
G48075 NA non-coding upstream 36988 8674473 ~ 8677331 (+)
G48063 NA non-coding upstream 181518 8532596 ~ 8532801 (+)
G48039 NA non-coding upstream 266005 8448107 ~ 8448314 (+)
G48018 NA non-coding upstream 332590 8381491 ~ 8381729 (+)
G48160 NA non-coding downstream 1319 8715887 ~ 8716184 (+)
G48176 NA non-coding downstream 29066 8743634 ~ 8747729 (+)
G48205 NA non-coding downstream 111890 8826458 ~ 8826676 (+)
G48206 NA non-coding downstream 129341 8843909 ~ 8851173 (+)
G48259 NA non-coding downstream 412242 9126810 ~ 9127014 (+)
G48077 NA other upstream 26355 8680282 ~ 8687964 (+)
LOC120559293 pifo other upstream 51428 8654412 ~ 8662891 (+)
LOC120559763 NA other upstream 216925 8478123 ~ 8497394 (+)
pkig pkig other upstream 333741 8342750 ~ 8380578 (+)
G47903 LOC104965021 other upstream 598091 8112441 ~ 8116228 (+)
G48162 NA other downstream 2199 8716767 ~ 8726552 (+)
LOC120559255 tshz2 other downstream 275919 8990487 ~ 9121912 (+)
G48347 NA other downstream 689656 9404224 ~ 9429947 (+)
ubxn10 NA other downstream 1208032 9922600 ~ 9925081 (+)
agmat agmat,LOC102790280 other downstream 1425030 10139598 ~ 10151251 (+)

Expression


Co-expression Network