G48160


Basic Information

Item Value
gene id G48160
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8715887 ~ 8716184 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64302
TTTttgaccaagtagttacaggaacgtagttataggaacagtccacttctaaacagctctactaactactctcccccaaaaccggttttgccatttgcattcgcactggccaagtggccataggaactggtaggaggggtaagggagtgacgCAAGCACGGCAATGGTCTTTATAGCGTCGTCACTTGACTTTAGTGCCACATACGACAACAAACCAGCATGGAGGTGGCCATGGGAATGTTCCTGTTGTACCTTGCCGGGATCCTCATAACGGAGTTCGAACGGCGGCGTATAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64302 True 298 lncRNA 0.49 1 8715887 8716184

Neighbor

gene id symbol gene type direction distance location
LOC120559286 NA coding upstream 61571 8645778 ~ 8654316 (+)
itih6 itih6 coding upstream 83062 8605863 ~ 8632825 (+)
LOC120559284 pfkfb1,LOC100700435,LOC101066702 coding upstream 110129 8562053 ~ 8605758 (+)
LOC120559288 NA coding upstream 145556 8569081 ~ 8570331 (+)
LOC120559290 NA coding upstream 154804 8558038 ~ 8561083 (+)
pfdn4 pfdn4 coding downstream 484568 9200752 ~ 9210559 (+)
LOC120558451 LOC100703402 coding downstream 517976 9234160 ~ 9236016 (+)
cd40 NA coding downstream 641788 9357972 ~ 9366078 (+)
zbtb48 LOC102780700 coding downstream 819223 9535407 ~ 9544237 (+)
syt6a syt6,LOC103150978,LOC106928401,LOC103467834 coding downstream 881442 9597626 ~ 9689330 (+)
G48158 NA non-coding upstream 1319 8714319 ~ 8714568 (+)
G48079 camk1g,LOC102780232,LOC102204221,LOC101478990,LOC103361639 non-coding upstream 15799 8690703 ~ 8700088 (+)
G48075 NA non-coding upstream 38556 8674473 ~ 8677331 (+)
G48063 NA non-coding upstream 183086 8532596 ~ 8532801 (+)
G48039 NA non-coding upstream 267573 8448107 ~ 8448314 (+)
G48176 NA non-coding downstream 27450 8743634 ~ 8747729 (+)
G48205 NA non-coding downstream 110274 8826458 ~ 8826676 (+)
G48206 NA non-coding downstream 127725 8843909 ~ 8851173 (+)
G48259 NA non-coding downstream 410626 9126810 ~ 9127014 (+)
G48264 NA non-coding downstream 464379 9180563 ~ 9183148 (+)
G48077 NA other upstream 27923 8680282 ~ 8687964 (+)
LOC120559293 pifo other upstream 52996 8654412 ~ 8662891 (+)
LOC120559763 NA other upstream 218493 8478123 ~ 8497394 (+)
pkig pkig other upstream 335309 8342750 ~ 8380578 (+)
G47903 LOC104965021 other upstream 599659 8112441 ~ 8116228 (+)
G48162 NA other downstream 583 8716767 ~ 8726552 (+)
LOC120559255 tshz2 other downstream 274303 8990487 ~ 9121912 (+)
G48347 NA other downstream 688040 9404224 ~ 9429947 (+)
ubxn10 NA other downstream 1206416 9922600 ~ 9925081 (+)
agmat agmat,LOC102790280 other downstream 1423414 10139598 ~ 10151251 (+)

Expression


Co-expression Network