G48176


Basic Information

Item Value
gene id G48176
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 8743634 ~ 8747729 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64321
CCCCAAACTAAACTAATGCGTAATTTATTGTATCCGACTTCCGAAACATTTCATCAGCTCAAAATCATATCTATAAGCAATTCTCATGGGAAAAGTCCTGAGGTAAAGATGAAACCCAAACAGCAATAGGATTAAAACAGTTTTGAGGTCCTTGTACATTACCTGACTATTCCCGTTTTATGATAGCTACTTTGTACTCCTACTCcacatttcagaggcaaatattgtactttttactttatgTGACAGCTATGCTTAGTGTTTACTCTGCAAATGgagattttacatacaaaaccaTGTAatcagagaaaaacagaaaacgaACGAAAAGCCTACCGATTAAACTACCCCAATTATACAAAGTAGTTGAAATTAGCTCCACCTCGACCAGTTCCAACATGTAAAAGCTGTTAACACgttaatgcatcagtaataataatcaatTCATATAACGTAATAATATAACACAGACAAGTGTCTGCATCATGAGTAGTCGTACATTTTAGTAGTTGAGTACTTCCAGCACTGTGTTACAATAGGATTTGCAAACATGATTACATATAAATACAATATTTCATGTAATGTAGGTAAGATAAGAATGTTCTATGAGCTGTGGACACAATCATGGGCAGTGTCTCAATACTACACAGttgatgaagaaaaacaaaatttaaaaatgactaaaatttTTTCATGGATTTCTTTCCGATGTTCATATCACTATAAACACATTGActttctgcatttaaaaaacaaaaaacatagtatTCCTACTTGAATGAAGTTATGCTGTAATAATAGCAAGGCCACTTTCAACAAATTGTGGATTTAGTTCACAATATTCACGATCACTTTCACCTTTTCTGAGGCAACTGACAACTGAAAGTAAAAAGCAGGTCAATTATTGGTTATGACCTTTGATCACAGACTTCGGATTCACTTCAAATACAAACTCAGTCAGCTCTTCCTGATTATGGAGACCAAATTGATTCAAACACCATAGGATACGGTCTGAAATATACAAATTTTATTCAAACGTTCGTACTTTCAAATTTGAACAAGATTCAGTAGGATTTAACAAAGAGCTATGTATCTGAAAATCCCCATTGGATACAGTAGAaaaagagtatatatatatataggaatatcacagatttaaaaaaatatctgcaTAGCAAGAAGACCCACAGAACCCAAAAGGAAATGTCCTTGGCTTGTGAGCAAGGCTGCATCCAATATGATCTTTTTCGTGCACTTTTTGCTCATGAGGATCCAATGAGACAAAGAAGGGGACAATGCCAGACAGCCCGACTACACCCATGCAGGTTAAATGCATTAATTGTGACATAACCTGTGTCCACAGGACACAGTGGATGTTACACGGAGATCAAACGTGGTGGCACTCACACCCCTCTTCTGTATGGAGTTATGTAATCATAATGAGTAGTGCTTCATGAACAAGCTGGAGACGTCAATGACAAAccattgaacacacacacacacacacacacacacacacacacacacactatctttgtggggacccatcattgacctaatgcattccctagccccttaccttaatcatcacaactaaatgcctaaccttaacccttaccctcaccctaaccataacataATTCTATCCCCAATTCCTAAAACCAAGTATTAACCCttaaacagccctttaaagttgtgggatccaacacacacacacacacacaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcctctgaagcagcaccaaaatgactagatAGAAGATTATCACAATGTaaacatttgtggttttgattgTATTATGGGAAGGAGTAATGCTGCTAGATGATCACAACTGTTGTCAGTCAGGGGATAGGGAGCAGTTCTCCACACCAATTCAAGTCATActgaaaatgtacaaaaatacgTGCACAGAAACAACATACTTGTAATGTGAAAGCGTCTCTATAACATATATCGATATTGTCAGAGGTTATTCAACCCATAAAAGTACCATAAACGTTAACGTTTGAACAATGGGCAAACTAAACAATTGGGTTATTTTAAAAGGAATAAATTATAAAAGGTGATATATATACAATAAGGATATTTACAATTACGTTTCAAGATGCCAATTGATTTGCTATGCATGATGTATGCATATGGGATTGGCGTTCTGGTCTGCCTCCTGCAGGCTGAAGGAAGCACAGCACAGGGTCGCTCTGTTGCTCATTTAAGCAGCACAGAAAACGGAATATCTCCAGTGTACGATTGTGCACAAAGATGCACTAATTACGGACATACTGAGGTTGATTCAAGATAGAAATCTGCATATTAATGAAGGTTAGAACTGAAAGGAGACAAGAAGATTCCCCTGATTTTAATTTGAATGCTTGAAAACAAATCGGCACCTTGAAACCTCTCTCTGGTGAGCCGGTTGGTACAGTACACAGGCGCGGGATCCCAAAAAACAGTGGATTATCCTTTAAGAAGAAGAACTGCTTACACAACTCAAACTTCATTGTAAGAAAAGTAGAGTAGTAAAATACACGTTTACACAGTAGAAGAGAGTACAAAAGGGACTTTCATTGGCACAAAAAATCCTTGCAGCAGATTTCTAGTCTTCTCCATCTCTATCCTGAGATGACCGTTAGTGATCAGTAGCCATTTGTTTGTAAGAAAAGTCAACAATTAGAAAATAAGAGATAGACTCTGCGTCTTCTCCTCTTTGAGTTgagctgtatgtatgtatgtatgtatgtatgtatgtatgtatatgtatgtatgtatgtatatgtgtatgtatgtatatatatatgtagttcACAGCGATAAACCAATTTGTCCTATTGGTGCGTGAGACTACACACTCTGATGACAATCATGGGCTTGTACTAAATCTCACAGCGGTGAAACGCTAGCCAAAATGTTGTACAGGGGAAGCAtgattgtaaaataaaaatctttttaCCTGAACACATTCCAGTTGATCCAGGTCTAATAACGAAATAAAGCCCGAAATATCCTGGCAAATTATTGTACGTCCCAAATAGTTACTTGTCGAGTGGCAAAATGGAAGACCGGCTCCGAGCATGTGTGCTTCCCaaagaaaatgtagtaaaaaTAGACATCCTGAAGTGATGCTTTCAGCAGGGCAACGCTTATATCCAACATTTATTCTCTGAACTCCCATGTTTGACCCATCTGCAGTATTTTACATAGTCATAGTCTGGGGTCAATTGCAGTGTCGAAGCTGGCAAACTAGGTGAGTTAACAAAGGAAAAGTGCATGGGAAATGTGTATCATTAGGGCCACCTTAAAAACACTAGGAAGGTAGAAAAACCGGCTTGGCTGTGTAGGGTGTTGATTTCACGgacaagacaaaataacacaGTACTGTATGACAAACCCTAAAATAATACCACAGTTTAGTCTTTTACTTTGACAAACATTGCCTCAGAGCTGCTGACACGTTGGAGAGCATGACAATGACTTTGGAAAGAGGCAGGAACTGAAATTTTGCAGATTGGTCGGATCGGATGTCCCACTGATACTCCTCAGAGTTACTGACTGTACTCAGAATGCAGTCGGCTTTCTGCCCCgttatactgtacacacataaCCCTCACACACATACCATGTCCATGCACTCTGTATTAGATGCGCATGCTCAGTTTTGCACATGCATGACGCATGCACATTTCCACGTGCAGCCCAGTTACAGGTTCTCTCCCGGCTGGTACTGAGGCTCCGTGGAGGTGAAGTAATCCTCCAGGAAGCCCTGCAGGTACTCGAACGTGGGCCTCTCCTCTGGCTCTTTCCTCCAGCAGGTCAGCATCAGCTCGTGCATGGATTCAGGGCACTCTGCTGGGCACGGCATCCTGTAGCCCCGCTCCACCTGGTCCAACACCTCCCGGTT
>TU64322
cacacacacacgcctctgaagcagcaccaaaatgactagatAGAAGATTATCACAATGTaaacatttgtggttttgattgTATTATGGGAAGGAGTAATGCTGCTAGATGATCACAACTGTTGTCAGTCAGGGGATAGGGAGCAGTTCTCCACACCAATTCAAGTCATActgaaaatgtacaaaaatacgTGCACAGAAACAACATACTTGTAATGTGAAAGCGTCTCTATAACATATATCGATATTGTCAGAGGTTATTCAACCCATAAAAGTACCATAAACGTTAACGTTTGAACAATGGGCAAACTAAACAATTGGGTTATTTTAAAAGGAATAAATTATAAAAGGTGATATATATACAATAAGGATATTTACAATTACGTTTCAAGATGCCAATTGATTTGCTATGCATGATGTATGCATATGGGATTGGCGTTCTGGTCTGCCTCCTGCAGGCTGAAGGAAGCACAGCACAGGGTCGCTCTGTTGCTCATTTAAGCAGCACAGAAAACGGAATATCTCCAGTGTACGATTGTGCACAAAGATGCACTAATTACGGACATACTGAGGTTGATTCAAGATAGAAATCTGCATATTAATGAAGGTTAGAACTGAAAGGAGACAAGAAGATTCCCCTGATTTTAATTTGAATGCTTGAAAACAAATCGGCACCTTGAAACCTCTCTCTGGTGAGCCGGTTGGTACAGTACACAGGCGCGGGATCCCAAAAAACAGTGGATTATCCTTTAAGAAGAAGAACTGCTTACACAACTCAAACTTCATTGTAAGAAAAGTAGAGTAGTAAAATACACGTTTACACAGTAGAAGAGAGTACAAAAGGGACTTTCATTGGCACAAAAAATCCTTGCAGCAGATTTCTAGTCTTCTCCATCTCTATCCTGAGATGACCGTTAGTGATCAGTAGCCATTTGTTTGTAAGAAAAGTCAACAATTAGAAAATAAGAGATAGACTCTGCGTCTTCTCCTCTTTGAGTTgagctgtatgtatgtatgtatgtatgtatgtatgtatatgtgtatgtatgtatatatatatgtagttcACAGCGATAAACCAATTTGTCCTATTGGTGCGTGAGACTACACACTCTGATGACAATCATGGGCTTGTACTAAATCTCACAGCGGTGAAACGCTAGCCAAAATGTTGTACAGGGGAAGCAtgattgtaaaataaaaatctttttaCCTGAACACATTCCAGTTGATCCAGGTCTAATAACGAAATAAAGCCCGAAATATCCTGGCAAATTATTGTACGTCCCAAATAGTTACTTGTCGAGTGGCAAAATGGAAGACCGGCTCCGAGCATGTGTGCTTCCCaaagaaaatgtagtaaaaaTAGACATCCTGAAGTGATGCTTTCAGCAGGGCAACGCTTATATCCAACATTTATTCTCTGAACTCCCATGTTTGACCCATCTGCAGTATTTTACATAGTCATAGTCTGGGGTCAATTGCAGTGTCGAAGCTGGCAAACTAGGTGAGTTAACAAAGGAAAAGTGCATGGGAAATGTGTATCATTAGGGCCACCTTAAAAACACTAGGAAGGTAGAAAAACCGGCTTGGCTGTGTAGGGTGTTGATTTCACGgacaagacaaaataacacaGTACTGTATGACAAACCCTAAAATAATACCACAGTTTAGTCTTTTACTTTGACAAACATTGCCTCAGAGCTGCTGACACGTTGGAGAGCATGACAATGACTTTGGAAAGAGGCAGGAACTGAAATTTTGCAGATTGGTCGGATCGGATGTCCCACTGATACTCCTCAGAGTTACTGACTGTACTCAGAATGCAGTCGGCTTTCTGCCCCgttatactgtacacacataaCCCTCACACACATACCATGTCCATGCACTCTGTATTAGATGCGCATGCTCAGTTTTGCACATGCATGACGCATGCACATTTCCACGTGCAGCCCAGTTACAGGTTCTCTCCCGGCTGGTACTGAGGCTCCGTGGAGGTGAAGTAATCCTCCAGGAAGCCCTGCAGGTACTCGAACGTGGGCCTCTCCTCTGGCTCTTTCCTCCAGCAGGTCAGCATCAGCTCGTGCATGGATTCAGGGCACTCTGCTGGGCACGGCATCCTGTAGCCCCGCTCCACCTGGTCCAACACCTCCCGGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64321 True 3998 lncRNA 0.40 2 8743634 8747729
TU64322 False 2159 lncRNA 0.42 2 8745451 8747729

Neighbor

gene id symbol gene type direction distance location
LOC120559286 NA coding upstream 89318 8645778 ~ 8654316 (+)
itih6 itih6 coding upstream 110809 8605863 ~ 8632825 (+)
LOC120559284 pfkfb1,LOC100700435,LOC101066702 coding upstream 137876 8562053 ~ 8605758 (+)
LOC120559288 NA coding upstream 173303 8569081 ~ 8570331 (+)
LOC120559290 NA coding upstream 182551 8558038 ~ 8561083 (+)
pfdn4 pfdn4 coding downstream 453023 9200752 ~ 9210559 (+)
LOC120558451 LOC100703402 coding downstream 486431 9234160 ~ 9236016 (+)
cd40 NA coding downstream 610243 9357972 ~ 9366078 (+)
zbtb48 LOC102780700 coding downstream 787678 9535407 ~ 9544237 (+)
syt6a syt6,LOC103150978,LOC106928401,LOC103467834 coding downstream 849897 9597626 ~ 9689330 (+)
G48160 NA non-coding upstream 27450 8715887 ~ 8716184 (+)
G48158 NA non-coding upstream 29066 8714319 ~ 8714568 (+)
G48079 camk1g,LOC102780232,LOC102204221,LOC101478990,LOC103361639 non-coding upstream 43546 8690703 ~ 8700088 (+)
G48075 NA non-coding upstream 66303 8674473 ~ 8677331 (+)
G48063 NA non-coding upstream 210833 8532596 ~ 8532801 (+)
G48205 NA non-coding downstream 78729 8826458 ~ 8826676 (+)
G48206 NA non-coding downstream 96180 8843909 ~ 8851173 (+)
G48259 NA non-coding downstream 379081 9126810 ~ 9127014 (+)
G48264 NA non-coding downstream 432834 9180563 ~ 9183148 (+)
G48269 NA non-coding downstream 441649 9189378 ~ 9192209 (+)
G48162 NA other upstream 17082 8716767 ~ 8726552 (+)
G48077 NA other upstream 55670 8680282 ~ 8687964 (+)
LOC120559293 pifo other upstream 80743 8654412 ~ 8662891 (+)
LOC120559763 NA other upstream 246240 8478123 ~ 8497394 (+)
pkig pkig other upstream 363056 8342750 ~ 8380578 (+)
LOC120559255 tshz2 other downstream 242758 8990487 ~ 9121912 (+)
G48347 NA other downstream 656495 9404224 ~ 9429947 (+)
ubxn10 NA other downstream 1174871 9922600 ~ 9925081 (+)
agmat agmat,LOC102790280 other downstream 1391869 10139598 ~ 10151251 (+)
G48640 NA other downstream 1866302 10614031 ~ 10750428 (+)

Expression


Co-expression Network