G48264


Basic Information

Item Value
gene id G48264
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9180563 ~ 9183148 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64443
ATTTAACTTGTGTGCATTAAAATGATTTGGAAGAATGCCCTTTGTGATTTTAGCCAAACTTGCTGAACCACATATTTCTTTGCAGTTTTTACAACACCGAGTTAGTCTTAAAGAAGATCAAACAAACtgtgaacatatttattgtctTCGAGATAGCTGAAGTTACACATGCACGCATACATACATTTAGGCAAACATAAGAATGATATTAATTGCACACATGCCAAACACGAATGACTAACACCATAAGACTTCCATTAAATTCCATGACACAAAGTGCTACAGTTAAATGAAAAGCTAATCAACTGGGATTTATGACGACTGCAAAACATACCACAAGGACACAGTGGCACAGCGACACCATTTTGCCACCTCAGATGAATTTGTTACACTTAACAATCAGTTCCCCACAGAACAGTAAAGATTGTGATTTTCCCATATGGCCCAATACATGACTGTTAGGATACGTGTGCGCTTTAGTCTACATATAGCTTTCATAAAGTTACAAAACCTGTAAGTGCAATTTGTTATATACGGAAATGCTCCTCTCATCAGCTCTGTTAGGAGCttttcattttaatgtcatATAGATTTAAGTACTTATTTCAATGTCATTTCATATTAACCTCTGCATAGCCACAACTGCGTGATTTTTTTCTGGTGTGAACTGTAAAAATAGAACCCTTTTGACAAAGTAATTGCTAAAAGCAAAGCATGGTACCGTCTGTTGCATAAGCCCGGTGTGTTAGGTCGCAAGAACAGAGAGAAGTCACATTGAATGTCTGTAGAAAAGGTTTCACACTCACATTGCTATATGTGTCAAGACATTTAAATgtccaaaaaatatataaatatatatatatgtatctcAATAACCTCGCCTTGGACCATTTCAAATCGCCACATGTTCAACTACCTGCCCACTCTTCGTCTTTCAACAACATGCTCTTACCCTTCGTGTCACTTTTCTTTCCATATTGTAACTTCTGAAcagtaacaaaataaaaataaaaaaggagttAAAGTAATTCAATAAGAGTTGAAAGGGAGatgagacagagtgagagataaAGATTGAGTAAGAgcaagaaagagagggggggtcTGTACAGGGAAACTGTATTGTTGGCTTTGGTTTCATTTGGCCTTCTCAGCTGCTGGAGCAACAGGGACCGGCTCTGTCTGGACCCCGGCATCTGTCGAGTTACGTTTCTGACCCAGATGTTTAAAGAACAGTTGGATTGAGTTCCTCTTCTCCAGTTTCCTGGGCACATTGGCTGCATCATCTCCAGCTTGGGGGGCCACCGAAGCTGGTTTGTTGTCTACGACCGCCTCTGATGACTTGGCTGCTGCTTTGGGTTCCTCTTTGGCTTTTACTGTCTCTGCTGCAGCTGGGGCAGGGCTCGCCTTCTGGGGATCAGCAGCCTGAAAGGGTTGCAGAcgcacaatacaaaaaaaaaaactgaacaatACCAGTCTGAGAGCAGCCTTCTCTAcagggacgtgcacagacattttgggGGTCAGGGCAACATGACATCacgacttcgcgtaaacatacacgcccactttcttaaaCCAAGTGGTGttttatctgtacgcattttgagctatattgtatgtctacgctgtatacagcggacgtaaacatacacgccaagtggcgtgttatctggatgcattttgagcgccgtatacagcggacaggttgggtttaggaaaagaagaaccggttgggtttaggaaaagaacaaagcgacggttgagtttaggaaacgaaGGAAACGCAACATGCGGGACACGATCcacgctctcctgggtgaaagtcaaattgcgtaaattcacacgcaatcgcaggGTAacgtaagtcaatggaggccaaacggcgttgataaacacgctacaaagcgagtatgcgtcttgataacacgccaataatggcacacttcatgagatcagtctggacaGGGGCTCATAacgttttataaaaaaaaaaaaaaaaaggaaaaatattaacagAACTCTGACTTGTGGACTTACTGTTGTGATCTGTCAGTACTGTTGGTGAATAAACACTTTGGGATATAGCTGCTGTCTATGTCGTTTTGTACAAAAGTGAATCTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64443 True 2126 lncRNA 0.41 2 9180563 9183148

Neighbor

gene id symbol gene type direction distance location
LOC120559286 NA coding upstream 526247 8645778 ~ 8654316 (+)
itih6 itih6 coding upstream 547738 8605863 ~ 8632825 (+)
LOC120559284 pfkfb1,LOC100700435,LOC101066702 coding upstream 574805 8562053 ~ 8605758 (+)
LOC120559288 NA coding upstream 610232 8569081 ~ 8570331 (+)
LOC120559290 NA coding upstream 619480 8558038 ~ 8561083 (+)
pfdn4 pfdn4 coding downstream 17604 9200752 ~ 9210559 (+)
LOC120558451 LOC100703402 coding downstream 51012 9234160 ~ 9236016 (+)
cd40 NA coding downstream 174824 9357972 ~ 9366078 (+)
zbtb48 LOC102780700 coding downstream 352259 9535407 ~ 9544237 (+)
syt6a syt6,LOC103150978,LOC106928401,LOC103467834 coding downstream 414478 9597626 ~ 9689330 (+)
G48259 NA non-coding upstream 53549 9126810 ~ 9127014 (+)
G48206 NA non-coding upstream 329390 8843909 ~ 8851173 (+)
G48205 NA non-coding upstream 353887 8826458 ~ 8826676 (+)
G48176 NA non-coding upstream 432834 8743634 ~ 8747729 (+)
G48160 NA non-coding upstream 464379 8715887 ~ 8716184 (+)
G48269 NA non-coding downstream 6230 9189378 ~ 9192209 (+)
G48294 NA non-coding downstream 60206 9243354 ~ 9256285 (+)
G48310 NA non-coding downstream 103911 9287059 ~ 9287662 (+)
LOC120559475 NA non-coding downstream 118206 9301354 ~ 9345114 (+)
G48338 NA non-coding downstream 184737 9367885 ~ 9381444 (+)
LOC120559255 tshz2 other upstream 58651 8990487 ~ 9121912 (+)
G48162 NA other upstream 454011 8716767 ~ 8726552 (+)
G48077 NA other upstream 492599 8680282 ~ 8687964 (+)
LOC120559293 pifo other upstream 517672 8654412 ~ 8662891 (+)
LOC120559763 NA other upstream 683169 8478123 ~ 8497394 (+)
G48347 NA other downstream 221076 9404224 ~ 9429947 (+)
ubxn10 NA other downstream 739452 9922600 ~ 9925081 (+)
agmat agmat,LOC102790280 other downstream 956450 10139598 ~ 10151251 (+)
G48640 NA other downstream 1430883 10614031 ~ 10750428 (+)
G48752 NA other downstream 1989447 11172595 ~ 11173654 (+)

Expression


Co-expression Network