Gene
RNA
| Item | Value |
|---|---|
| gene id | G48269 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 9189378 ~ 9192209 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0031589 | cell-substrate adhesion | biological_process |
| GO:0007160 | cell-matrix adhesion | biological_process |
| id | description |
|---|---|
| ko05014 | Amyotrophic lateral sclerosis |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU64448 | True | 555 | lncRNA | 0.50 | 3 | 9189378 | 9192209 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120559286 | NA | coding | upstream | 535062 | 8645778 ~ 8654316 (+) |
| itih6 | itih6 | coding | upstream | 556553 | 8605863 ~ 8632825 (+) |
| LOC120559284 | pfkfb1,LOC100700435,LOC101066702 | coding | upstream | 583620 | 8562053 ~ 8605758 (+) |
| LOC120559288 | NA | coding | upstream | 619047 | 8569081 ~ 8570331 (+) |
| LOC120559290 | NA | coding | upstream | 628295 | 8558038 ~ 8561083 (+) |
| pfdn4 | pfdn4 | coding | downstream | 8543 | 9200752 ~ 9210559 (+) |
| LOC120558451 | LOC100703402 | coding | downstream | 41951 | 9234160 ~ 9236016 (+) |
| cd40 | NA | coding | downstream | 165763 | 9357972 ~ 9366078 (+) |
| zbtb48 | LOC102780700 | coding | downstream | 343198 | 9535407 ~ 9544237 (+) |
| syt6a | syt6,LOC103150978,LOC106928401,LOC103467834 | coding | downstream | 405417 | 9597626 ~ 9689330 (+) |
| G48264 | NA | non-coding | upstream | 6230 | 9180563 ~ 9183148 (+) |
| G48259 | NA | non-coding | upstream | 62364 | 9126810 ~ 9127014 (+) |
| G48206 | NA | non-coding | upstream | 338205 | 8843909 ~ 8851173 (+) |
| G48205 | NA | non-coding | upstream | 362702 | 8826458 ~ 8826676 (+) |
| G48176 | NA | non-coding | upstream | 441649 | 8743634 ~ 8747729 (+) |
| G48294 | NA | non-coding | downstream | 51145 | 9243354 ~ 9256285 (+) |
| G48310 | NA | non-coding | downstream | 94850 | 9287059 ~ 9287662 (+) |
| LOC120559475 | NA | non-coding | downstream | 109145 | 9301354 ~ 9345114 (+) |
| G48338 | NA | non-coding | downstream | 175676 | 9367885 ~ 9381444 (+) |
| G48369 | NA | non-coding | downstream | 328549 | 9520758 ~ 9521651 (+) |
| LOC120559255 | tshz2 | other | upstream | 67466 | 8990487 ~ 9121912 (+) |
| G48162 | NA | other | upstream | 462826 | 8716767 ~ 8726552 (+) |
| G48077 | NA | other | upstream | 501414 | 8680282 ~ 8687964 (+) |
| LOC120559293 | pifo | other | upstream | 526487 | 8654412 ~ 8662891 (+) |
| LOC120559763 | NA | other | upstream | 691984 | 8478123 ~ 8497394 (+) |
| G48347 | NA | other | downstream | 212015 | 9404224 ~ 9429947 (+) |
| ubxn10 | NA | other | downstream | 730391 | 9922600 ~ 9925081 (+) |
| agmat | agmat,LOC102790280 | other | downstream | 947389 | 10139598 ~ 10151251 (+) |
| G48640 | NA | other | downstream | 1421822 | 10614031 ~ 10750428 (+) |
| G48752 | NA | other | downstream | 1980386 | 11172595 ~ 11173654 (+) |
