ubxn10


Basic Information

Item Value
gene id ubxn10
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9922600 ~ 9925081 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64733
GCAGagacaaaaataaattgtgttCAATGCATgctaaacagacaaacaataggCCTTTTCCACAGAACACATTTGATGTGTCGCAGTAGGAACAGGCGAGCATGATACAATAATGAACAAAGCCAATGTCATTAGCAGCACGTTATTGCTCGTCTTTcagagtcaaaatgtctgctgtggaaaAGGCCACCTGCAAACAACCCTCACTTTGTTCTGAGCAAGACATACTAAAAATGTATGTCGGGATGGATAAGAGCTGTTTATGAAGACTGAAAGTACCACAATATGACTAAAAACTCAGACACTAAAGTGCAGAGAACTTGGAGGTAACAGGCTTGTTAGCTTTTGAACATATGAATGTATATTCCCTG
>XM_039801490.1
ACTGTCATGACAACAACCTCGCTGACGCTTAAAGAGAGGCACTTCCTGCTGGAAAGCACGCAAACgggatttttaaaaaacatttttaacttGTAAATGTAGCTTCAGTAGGACGCATCCGTTCTCCCGCGTAGCGAAGCGGCTTTTAAGACAACGAGGCATGCTTTTCTTCGactcttttgttgttgttgttgttgttgtgaagaACTGAAGCCAAGAAACAACTGGGACTCTCCACTGGCAGACAGACAAGACTGTTCTGAACTCCAATGCAAGAGCGAACGTTGCCAGCTGGTTGTTATCGATGCATGTAACCAGGCCGAAGTCCTCCAAAGGGCGAAGCAGAGCGGCTGTAAACGCCTCTCTGTATTCGGGGGACCCAGGCGGCAGCAGCACCCAGAGGCCACCCGTGTCTCCAGATTCTCCCGTGTGCAGCAGGCCAGACAGGAGCCTCCGCTCCCAGTCTCAGCCCATAATGTGGCAGGCCAGCCAGCTGAGCCAGGATGAGGTTCTGCAGATGCTGCAGCACGCCCCCGCTGCTCCACCGCAGTCATTAAACAAGTACAAGGTTCTGCCATCCATAGGGGGGAGGCAGTCAGAGGTGAGTCCCGGGATAAGCCTGGACAAAAAGATTTCCAAGCTCAGTCTGTCTGATGATGCTATCCATCGGCCAGGGTGCAGCCACGGAGAGTCAGATCCCCCCACAGTGAAGGGTGTGacccagagcagcagcagcagctctgagGTGGATAAGAGGGCTGGGGTCTGGCCTAAGCCCCCTGATCCAGGATCAGTCCTTACCAAAGTAGCTGGCAGTTTGCTCCTAGCTATCCGAGCACCATGTGGCAGAAGGTTCCAGCAGCACTTTGAGCCCACAGACACTCTGCTGATGGTGAGAGCCAGCGCAGAGCTCATGTATGGAGCGAAGTATGGAGAGGCCTCCATTGAGACCATGGATTTACCACGCAGGACCTTCACAGACATGGATGTGACCCTGGCCCAGTGTGGCATCCGGAACAGATCGGTGCTGTGCATCTCTCAGAATGGCAGTATGAGGGAGCGTGAGTGAGCTTCGCTGATTTTTTTTGCCGTTGAAGTCTGGCATCgtggtgtttaaaaaaagaaaaagaaaaatccctcctccactcaaaaatgtgtttcccTTTTTGTTTCTTCCCTTGGATGTTTGAGCTCCACTGTGCagaatgatgtgtgtgtgcagtttgaTATCATCAAAggctgttttcacatttgtaCTGCTGAAGGAGGAAAGTTTCTCTGTGCTCACCTTAAATCTTGTAGACAGCATGATTTTTTTTGGAGCCAACTGTGGATCAGTATGTTGGAGTTGGACACATGATAAAAGCCCATCTTTTTGACTTTTGGGGCTCCATAAGGTGCattaaatgtgaatgttttactagttcattttactttttttgtgggAAAAAACACATCAGACTCACATTATTCAAagcattttttatgacataaaaACATGTCTGGATGGGAATTTTTAATTTCACACAAGCTTATTTATTGTAAACCTTATTGACTATAGCAATTAAGGTCAATTAGGACCATTTATTCATCCAACTGATAACTTGTTTTGCTGCACTATTGCACAGAATGCTCACTGAAAGGTATCCTGTGTGGCTGTATATAACCACGAGTTCTGTTTCAGTTAAGCTAGACTTTATTCAAAACAGCAGGTCATTTTTATCTGCTGCCAGCTATTGACGTCGAGAAGAACATTTGATTCATCCGTGTTTATCTGGCATTTCATACTAAAGCAAAACCAGAAATGCCGCTGACAAACGCAGCAACGAAAAggttttctttgtttatttgttgccattttccacctcttttctttttggttGATGTTCTTATATGCCAAATAAAGTCTTTCATTAGGATGCAGAGGCACAGAAGCACATAACTAAGTTGCTACTATTTGGTTTAATTAATAGTACTTTACTTGTATACAACTTTTGCCCAGCTTTCAAAGCAtgtaaaacacaaatacataaaagTTATACCTAAATCCTGTGACTAGTTTTAAATTTTACAGACTTGTACATATATTTTGTCACTAGCGCAGagacaaaaataaattgtgttCAATGCATgctaaacagacaaacaataggCCTTTTCCACAGAACACATTTGATGTGTCGCAGTAGGAACAGGCGAGCATGATACAATAATGAACAAAGCCAATGTCATTAGCAGCACGTTATTGCTCGTCTTTcagagtcaaaatgtctgctgtggaaaAGGCCACCTGCAAACAACCCTCACTTTGTTCTGAGCAAGACATACTAAAAATGTATGTCGGGATGGATAAGAGCTGTTTATGAAGACTGAAAGTACCACAATATGACTAAAAACTCAGACACTAAAGTGCAGAGAACTTGGAGGTAACAGGCTTGTTAGCTTTTGAACATATGAATGTATATTCCCTGAAGAAATATAT

Function

NR:

description
UBX domain-containing protein 10

GO: NA

KEGG:

id description
K24352 UBXN10; UBX domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
TU64733 False 371 lncRNA 0.40 1 9924700 9925070
XM_039801490.1 True 2482 mRNA 0.44 1 9922600 9925081

Neighbor

gene id symbol gene type direction distance location
LOC120559339 cptp coding upstream 3968 9916527 ~ 9918632 (+)
LOC120559338 NA coding upstream 18157 9901990 ~ 9904443 (+)
sdf4 sdf4 coding upstream 160676 9754069 ~ 9761924 (+)
syt6a syt6,LOC103150978,LOC106928401,LOC103467834 coding upstream 233270 9597626 ~ 9689330 (+)
zbtb48 LOC102780700 coding upstream 378363 9535407 ~ 9544237 (+)
vwa5b1 vwa5b1 coding downstream 11468 9936549 ~ 9969923 (+)
fam43b fam43b coding downstream 71207 9996288 ~ 9999314 (+)
LOC120558778 NA coding downstream 98259 10023340 ~ 10116835 (+)
pink1 pink1 coding downstream 193604 10118685 ~ 10131254 (+)
hspg2 hspg2 coding downstream 237921 10163002 ~ 10288140 (+)
G48481 NA non-coding upstream 1792 9920048 ~ 9920808 (+)
G48415 LOC103359731 non-coding upstream 118254 9803739 ~ 9804346 (+)
G48400 NA non-coding upstream 156205 9764056 ~ 9766395 (+)
G48399 NA non-coding upstream 170055 9752026 ~ 9752545 (+)
G48398 NA non-coding upstream 170952 9751330 ~ 9751648 (+)
G48507 NA non-coding downstream 85755 10010836 ~ 10014383 (+)
G48594 NA non-coding downstream 478971 10404052 ~ 10404759 (+)
G48602 NA non-coding downstream 586741 10511822 ~ 10542926 (+)
LOC120559193 NA non-coding downstream 618928 10544009 ~ 10560240 (+)
G48639 NA non-coding downstream 661078 10586159 ~ 10586543 (+)
G48347 NA other upstream 492653 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 800688 8990487 ~ 9121912 (+)
G48162 NA other upstream 1196048 8716767 ~ 8726552 (+)
G48077 NA other upstream 1234636 8680282 ~ 8687964 (+)
LOC120559293 pifo other upstream 1259709 8654412 ~ 8662891 (+)
agmat agmat,LOC102790280 other downstream 214517 10139598 ~ 10151251 (+)
G48640 NA other downstream 688950 10614031 ~ 10750428 (+)
G48752 NA other downstream 1247514 11172595 ~ 11173654 (+)
G48765 NA other downstream 1389581 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 2159371 12084452 ~ 12090773 (+)

Expression


Co-expression Network