G48594


Basic Information

Item Value
gene id G48594
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10404052 ~ 10404759 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64888
TGCACACAGACGGTTCTTAGACACCGGAaggtttaaaggtcctatgacatgccgctttttggatgcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcttttatatagaccttagtggtcccctaatactgtatctgaagtctcgtttatatagaccttagtggtcccctaatactgtatctgaagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64888 True 294 lncRNA 0.40 2 10404052 10404759

Neighbor

gene id symbol gene type direction distance location
tmem269 LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555 coding upstream 87416 10303395 ~ 10316636 (+)
hspg2 hspg2 coding upstream 115912 10163002 ~ 10288140 (+)
pink1 pink1 coding upstream 272798 10118685 ~ 10131254 (+)
LOC120558778 NA coding upstream 287217 10023340 ~ 10116835 (+)
fam43b fam43b coding upstream 404738 9996288 ~ 9999314 (+)
LOC120559190 LOC103365742 coding downstream 125904 10530663 ~ 10540352 (+)
LOC120559192 NA coding downstream 169842 10574601 ~ 10583529 (+)
LOC120558406 NA coding downstream 189025 10593784 ~ 10747553 (+)
LOC120558407 NA coding downstream 353638 10758397 ~ 10811552 (+)
LOC120558497 NA coding downstream 912671 11317430 ~ 11328619 (+)
G48507 NA non-coding upstream 389669 10010836 ~ 10014383 (+)
G48481 NA non-coding upstream 483244 9920048 ~ 9920808 (+)
G48415 LOC103359731 non-coding upstream 599706 9803739 ~ 9804346 (+)
G48400 NA non-coding upstream 637657 9764056 ~ 9766395 (+)
G48399 NA non-coding upstream 651507 9752026 ~ 9752545 (+)
G48602 NA non-coding downstream 107063 10511822 ~ 10542926 (+)
LOC120559193 NA non-coding downstream 139250 10544009 ~ 10560240 (+)
G48639 NA non-coding downstream 181400 10586159 ~ 10586543 (+)
LOC120558408 NA non-coding downstream 231717 10636476 ~ 10637645 (+)
G48648 NA non-coding downstream 306953 10711712 ~ 10774796 (+)
agmat agmat,LOC102790280 other upstream 252801 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 478971 9922600 ~ 9925081 (+)
G48347 NA other upstream 974105 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 1282140 8990487 ~ 9121912 (+)
G48162 NA other upstream 1677500 8716767 ~ 8726552 (+)
G48640 NA other downstream 209272 10614031 ~ 10750428 (+)
G48752 NA other downstream 767836 11172595 ~ 11173654 (+)
G48765 NA other downstream 909903 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 1679693 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 1688020 12092779 ~ 12103899 (+)

Expression


Co-expression Network