G48602


Basic Information

Item Value
gene id G48602
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10511822 ~ 10542926 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64897
catccacgcGCTGCGTAgtgaaggaaggtctgactactccacacagcatgccgggatgggagaaaaacctgctgtggtttattggcatttctctaaaccaatcgTCATcggtggcgctaagcgccggacggagccgcTGTGAAATAgtcatgcgagagaaaactcggGGAAaagatttaccctgcagagatctgaggagcagttaaccatagtcctcagaaatccaccggaggttaaaattccaacacaaagaaagcggaaggtgacggacatccggccgaaaagagggacatcaagcgcaatttccggtggcaccggagcaatcccggaagtggaacatcgtggatctAGACTAGTCTGTGTGTAACCGAGAGTGTTCCccgcgtgtctctacgacgtgtaacgtcagacagccaatcagcagcattattagatctgggtagaagcatgctgcatgctcattggctcactgacgctgatgagattcaCTCCTTAGGTAtttaaatttggtattgaatgacgaggcacaTTTCGATACTTtgatactaaggaggcaattcaGTCGGTGCCTGAAAAGTTATGgaagttcggtacccagccctaagaATTGTAAAATGGGGATTGGTCAAGCAGCCACGCTGCatcttgtttttattgtttttctatTTATAAAAACTAGTGCTCACATGATGATTTGATTTTACATCTGCATGTCGCCTGGAAGAAACAATTACTAAATCATAGTATCCTACAGCACATACTAGATCCCATTCAggaatctgattggtttaataTATTATTGTTTGTCAGAAACATGACTTACTAGCTCAACGTAGAAATAAGTTGACAGTTCCAATATTGTCCCATCAGCCTTTggttgtatttgttgtgatgCTCTGTGTTCCAGCACCAATGATTGCTGCTGTTAATGTTTGTACCGAGGCATTTTTCATCATATTGTTATCTGTCAGTATCCTGGATGAAAAGTTACAGACAGTAGGGATCCGCTGCCAAGATGTTTCAGGCTTGTTAAGTaggaggaaacaaaaaaaaaaaacacaatgacaa

Function

GO:

id name namespace
GO:0009069 serine family amino acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64897 True 1068 lncRNA 0.44 2 10511822 10542926

Neighbor

gene id symbol gene type direction distance location
tmem269 LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555 coding upstream 195186 10303395 ~ 10316636 (+)
hspg2 hspg2 coding upstream 223682 10163002 ~ 10288140 (+)
pink1 pink1 coding upstream 380568 10118685 ~ 10131254 (+)
LOC120558778 NA coding upstream 394987 10023340 ~ 10116835 (+)
fam43b fam43b coding upstream 512508 9996288 ~ 9999314 (+)
LOC120559192 NA coding downstream 31675 10574601 ~ 10583529 (+)
LOC120558406 NA coding downstream 50858 10593784 ~ 10747553 (+)
LOC120558407 NA coding downstream 215471 10758397 ~ 10811552 (+)
LOC120558497 NA coding downstream 774504 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 809688 11352614 ~ 11382149 (+)
G48594 NA non-coding upstream 107063 10404052 ~ 10404759 (+)
G48507 NA non-coding upstream 497439 10010836 ~ 10014383 (+)
G48481 NA non-coding upstream 591014 9920048 ~ 9920808 (+)
G48415 LOC103359731 non-coding upstream 707476 9803739 ~ 9804346 (+)
G48400 NA non-coding upstream 745427 9764056 ~ 9766395 (+)
LOC120559193 NA non-coding downstream 1083 10544009 ~ 10560240 (+)
G48639 NA non-coding downstream 43233 10586159 ~ 10586543 (+)
LOC120558408 NA non-coding downstream 93550 10636476 ~ 10637645 (+)
G48648 NA non-coding downstream 168786 10711712 ~ 10774796 (+)
G48670 NA non-coding downstream 312576 10855502 ~ 10899132 (+)
agmat agmat,LOC102790280 other upstream 360571 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 586741 9922600 ~ 9925081 (+)
G48347 NA other upstream 1081875 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 1389910 8990487 ~ 9121912 (+)
G48162 NA other upstream 1785270 8716767 ~ 8726552 (+)
G48640 NA other downstream 71105 10614031 ~ 10750428 (+)
G48752 NA other downstream 629669 11172595 ~ 11173654 (+)
G48765 NA other downstream 771736 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 1541526 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 1549853 12092779 ~ 12103899 (+)

Expression


Co-expression Network