G48639


Basic Information

Item Value
gene id G48639
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 10586159 ~ 10586543 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU64943
aaaaaaacgtattggtttatgttaggcagattataaaacgtttttttctcaaacatgtcatgtccttttgtcgacgatcccgctgatgaaaaagctgtattacttcacagagagtttacgtcaggagatgatattgagtcccgactatagatgtattttcatttccacataaccgatttgagaggtatttttttcacagtccattagatatgtagataccttatccgtcctcatatcactaacatcaaccatcgtggacaggctttatcATCCAAGCAGAATCTTTGTgttgcattacgttttttgcaaacggcagttttctttataacattggtgatgcggagcatagCCTACTGTAATAGTAatgccactgtatgcagagccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64943 True 385 lncRNA 0.38 1 10586159 10586543

Neighbor

gene id symbol gene type direction distance location
LOC120559192 NA coding upstream 2630 10574601 ~ 10583529 (+)
LOC120559190 LOC103365742 coding upstream 45807 10530663 ~ 10540352 (+)
magi3a magi3 coding upstream 59825 10326748 ~ 10526334 (+)
tmem269 LOC103365731,LOC102791044,LOC104928629,LOC100689985,LOC100710458,LOC108237576,LOC101473555 coding upstream 269523 10303395 ~ 10316636 (+)
hspg2 hspg2 coding upstream 298019 10163002 ~ 10288140 (+)
LOC120558406 NA coding downstream 7241 10593784 ~ 10747553 (+)
LOC120558407 NA coding downstream 171854 10758397 ~ 10811552 (+)
LOC120558497 NA coding downstream 730887 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 766071 11352614 ~ 11382149 (+)
dazap2 dazap2 coding downstream 912329 11498872 ~ 11503554 (+)
LOC120559193 NA non-coding upstream 25919 10544009 ~ 10560240 (+)
G48602 NA non-coding upstream 43233 10511822 ~ 10542926 (+)
G48594 NA non-coding upstream 181400 10404052 ~ 10404759 (+)
G48507 NA non-coding upstream 571776 10010836 ~ 10014383 (+)
G48481 NA non-coding upstream 665351 9920048 ~ 9920808 (+)
LOC120558408 NA non-coding downstream 49933 10636476 ~ 10637645 (+)
G48648 NA non-coding downstream 125169 10711712 ~ 10774796 (+)
G48670 NA non-coding downstream 268959 10855502 ~ 10899132 (+)
G48671 LOC103365835,LOC104948831,LOC100710642 non-coding downstream 281315 10867858 ~ 10871077 (+)
G48680 NA non-coding downstream 320817 10907360 ~ 10960482 (+)
agmat agmat,LOC102790280 other upstream 434908 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 661078 9922600 ~ 9925081 (+)
G48347 NA other upstream 1156212 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 1464247 8990487 ~ 9121912 (+)
G48162 NA other upstream 1859607 8716767 ~ 8726552 (+)
G48640 NA other downstream 27488 10614031 ~ 10750428 (+)
G48752 NA other downstream 586052 11172595 ~ 11173654 (+)
G48765 NA other downstream 728119 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 1497909 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 1506236 12092779 ~ 12103899 (+)

Expression


Co-expression Network