G48752


Basic Information

Item Value
gene id G48752
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11172595 ~ 11173654 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65107
caaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatagaatccagctgtgtgtaatcaagtctccgtataaatgcacctgctctgtgatagtctcagaggtctgtgtaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttggggagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactccaaatctacgaagacccggccgtccctctaaactttcagctcatacaatgagaagactgatcagagatgcagccgcaagaggcccatgatcactctggatgaactgcagagatctacagctgagctgggagactctgtccataggacaacaatcagtcgtatactgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccaaaagccacctgggagacacaccaaacatgtggaagaaggtgctgtggtcagatgaaaccaaaatcgaactttttggcaacaatgcaaaactttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgctttgcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcacaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaacgctctccatccaacctcactgagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65107 True 1060 TUCP 0.44 1 11172595 11173654

Neighbor

gene id symbol gene type direction distance location
LOC120558407 NA coding upstream 361043 10758397 ~ 10811552 (+)
LOC120558406 NA coding upstream 425042 10593784 ~ 10747553 (+)
LOC120559192 NA coding upstream 589066 10574601 ~ 10583529 (+)
LOC120559190 LOC103365742 coding upstream 632243 10530663 ~ 10540352 (+)
magi3a magi3 coding upstream 646261 10326748 ~ 10526334 (+)
LOC120558497 NA coding downstream 143776 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 178960 11352614 ~ 11382149 (+)
dazap2 dazap2 coding downstream 325218 11498872 ~ 11503554 (+)
si:ch211-210c8.6 LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155 coding downstream 342990 11516644 ~ 11520131 (+)
LOC120558490 LOC102302598,LOC100690975 coding downstream 358545 11532199 ~ 11563315 (+)
G48680 NA non-coding upstream 212113 10907360 ~ 10960482 (+)
G48679 NA non-coding upstream 260523 10910143 ~ 10912072 (+)
G48670 NA non-coding upstream 273463 10855502 ~ 10899132 (+)
G48671 LOC103365835,LOC104948831,LOC100710642 non-coding upstream 301518 10867858 ~ 10871077 (+)
G48648 NA non-coding upstream 397799 10711712 ~ 10774796 (+)
G48755 NA non-coding downstream 34633 11208287 ~ 11208634 (+)
G48763 NA non-coding downstream 56353 11230007 ~ 11230366 (+)
G48803 NA non-coding downstream 261390 11435044 ~ 11456874 (+)
G48804 NA non-coding downstream 264618 11438272 ~ 11438557 (+)
G48805 csrnp2 non-coding downstream 285688 11459342 ~ 11459749 (+)
G48640 NA other upstream 422167 10614031 ~ 10750428 (+)
agmat agmat,LOC102790280 other upstream 1021344 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 1247514 9922600 ~ 9925081 (+)
G48347 NA other upstream 1742648 9404224 ~ 9429947 (+)
LOC120559255 tshz2 other upstream 2050683 8990487 ~ 9121912 (+)
G48765 NA other downstream 141008 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 910798 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 919125 12092779 ~ 12103899 (+)
nol4la LOC103354513,LOC100696587 other downstream 1008555 12182209 ~ 12210409 (+)
trnae-cuc_14 NA other downstream 1049913 12223567 ~ 12223638 (+)

Expression


Co-expression Network