G48755


Basic Information

Item Value
gene id G48755
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11208287 ~ 11208634 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65110
ttgtttaaataactcaacacacatacccattataagattaactggaacctgcgggctgcggtaaaagattgcgggcgtaacaagctcgctgacactgcggtcagggtggcgatgtagcaacccaggcagcaccaacaccggcactaaactccgacacacagtcggagaaaatttgcaattagccatccattttcgtaaagcggcccatatttgagctttatgtggttgatttctcgcataaaaaagtttcagaagtgaattttgtaatggaatagcagagatctgcgtgacctagctagattcagaaaactacctgatctcaggtcagttgtgtaaatgttggggcgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65110 True 348 lncRNA 0.45 1 11208287 11208634

Neighbor

gene id symbol gene type direction distance location
LOC120558407 NA coding upstream 396735 10758397 ~ 10811552 (+)
LOC120558406 NA coding upstream 460734 10593784 ~ 10747553 (+)
LOC120559192 NA coding upstream 624758 10574601 ~ 10583529 (+)
LOC120559190 LOC103365742 coding upstream 667935 10530663 ~ 10540352 (+)
magi3a magi3 coding upstream 681953 10326748 ~ 10526334 (+)
LOC120558497 NA coding downstream 108796 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 143980 11352614 ~ 11382149 (+)
dazap2 dazap2 coding downstream 290238 11498872 ~ 11503554 (+)
si:ch211-210c8.6 LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155 coding downstream 308010 11516644 ~ 11520131 (+)
LOC120558490 LOC102302598,LOC100690975 coding downstream 323565 11532199 ~ 11563315 (+)
G48680 NA non-coding upstream 247805 10907360 ~ 10960482 (+)
G48679 NA non-coding upstream 296215 10910143 ~ 10912072 (+)
G48670 NA non-coding upstream 309155 10855502 ~ 10899132 (+)
G48671 LOC103365835,LOC104948831,LOC100710642 non-coding upstream 337210 10867858 ~ 10871077 (+)
G48648 NA non-coding upstream 433491 10711712 ~ 10774796 (+)
G48763 NA non-coding downstream 21373 11230007 ~ 11230366 (+)
G48803 NA non-coding downstream 226410 11435044 ~ 11456874 (+)
G48804 NA non-coding downstream 229638 11438272 ~ 11438557 (+)
G48805 csrnp2 non-coding downstream 250708 11459342 ~ 11459749 (+)
G48806 csrnp2 non-coding downstream 252514 11461148 ~ 11461976 (+)
G48752 NA other upstream 34633 11172595 ~ 11173654 (+)
G48640 NA other upstream 457859 10614031 ~ 10750428 (+)
agmat agmat,LOC102790280 other upstream 1057036 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 1283206 9922600 ~ 9925081 (+)
G48347 NA other upstream 1778340 9404224 ~ 9429947 (+)
G48765 NA other downstream 106028 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 875818 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 884145 12092779 ~ 12103899 (+)
nol4la LOC103354513,LOC100696587 other downstream 973575 12182209 ~ 12210409 (+)
trnae-cuc_14 NA other downstream 1014933 12223567 ~ 12223638 (+)

Expression


Co-expression Network