G48763


Basic Information

Item Value
gene id G48763
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11230007 ~ 11230366 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65118
CACCTCCACACTTCATAAGCTCTGACCTGACATCCATTCCCTGCTGGATTGTTTGCCACCAACATTACTCTCCTTGACTCTACGCTCCACCCCTGCCTGGTTGTCTGTTGCTCCAGAAACGATGTTGGATCTGTTCATTCCCTCCCACCTACTCGCCTCCGCTGCCTGCTCCGACACCTGGATTCCCCTGCTTCCACATTCAAATCACTGAATAAATACTCCCCTTCATTCAACTCACCTTGTCCTGGTCTGCTTCTGGGTTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65118 True 266 lncRNA 0.52 2 11230007 11230366

Neighbor

gene id symbol gene type direction distance location
LOC120558407 NA coding upstream 418455 10758397 ~ 10811552 (+)
LOC120558406 NA coding upstream 482454 10593784 ~ 10747553 (+)
LOC120559192 NA coding upstream 646478 10574601 ~ 10583529 (+)
LOC120559190 LOC103365742 coding upstream 689655 10530663 ~ 10540352 (+)
magi3a magi3 coding upstream 703673 10326748 ~ 10526334 (+)
LOC120558497 NA coding downstream 87064 11317430 ~ 11328619 (+)
rapgef3 LOC103365870 coding downstream 122248 11352614 ~ 11382149 (+)
dazap2 dazap2 coding downstream 268506 11498872 ~ 11503554 (+)
si:ch211-210c8.6 LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155 coding downstream 286278 11516644 ~ 11520131 (+)
LOC120558490 LOC102302598,LOC100690975 coding downstream 301833 11532199 ~ 11563315 (+)
G48755 NA non-coding upstream 21373 11208287 ~ 11208634 (+)
G48680 NA non-coding upstream 269525 10907360 ~ 10960482 (+)
G48679 NA non-coding upstream 317935 10910143 ~ 10912072 (+)
G48670 NA non-coding upstream 330875 10855502 ~ 10899132 (+)
G48671 LOC103365835,LOC104948831,LOC100710642 non-coding upstream 358930 10867858 ~ 10871077 (+)
G48803 NA non-coding downstream 204678 11435044 ~ 11456874 (+)
G48804 NA non-coding downstream 207906 11438272 ~ 11438557 (+)
G48805 csrnp2 non-coding downstream 228976 11459342 ~ 11459749 (+)
G48806 csrnp2 non-coding downstream 230782 11461148 ~ 11461976 (+)
G48807 NA non-coding downstream 232907 11463273 ~ 11464079 (+)
G48752 NA other upstream 56353 11172595 ~ 11173654 (+)
G48640 NA other upstream 479579 10614031 ~ 10750428 (+)
agmat agmat,LOC102790280 other upstream 1078756 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 1304926 9922600 ~ 9925081 (+)
G48347 NA other upstream 1800060 9404224 ~ 9429947 (+)
G48765 NA other downstream 84296 11314662 ~ 11315992 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 854086 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 862413 12092779 ~ 12103899 (+)
nol4la LOC103354513,LOC100696587 other downstream 951843 12182209 ~ 12210409 (+)
trnae-cuc_14 NA other downstream 993201 12223567 ~ 12223638 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G425647 NA unknown NC_048569.1 CM023223.2 62894659 ~ 62900503 (-)
striped catfish (Pangasianodon hypophthalmus) G406389 NA non-coding NC_047624.1 CM018570.1 543515 ~ 545436 (-)