G48804


Basic Information

Item Value
gene id G48804
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11438272 ~ 11438557 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65172
AAGAGAGAGTAGaggacgatgtggtaaggagtaggcaaatcaacagggactctcaggaagggagggaggctgtgtgtgtgtgtgtgtgcgAGCGCGCGTTATGTGCGCctcacgtcataacgacaacaagccgtttggctgtaacattaaagttagtggctgtcaggtaacctaactgcttaagcttacattgaaaatgctagcggttagcctgttgggtagctgaaaagtctgtgtgatctataaaatcagtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65172 True 254 lncRNA 0.48 2 11438272 11438557

Neighbor

gene id symbol gene type direction distance location
rapgef3 LOC103365870 coding upstream 56123 11352614 ~ 11382149 (+)
LOC120558497 NA coding upstream 109653 11317430 ~ 11328619 (+)
LOC120558407 NA coding upstream 626720 10758397 ~ 10811552 (+)
LOC120558406 NA coding upstream 690719 10593784 ~ 10747553 (+)
LOC120559192 NA coding upstream 854743 10574601 ~ 10583529 (+)
dazap2 dazap2 coding downstream 60315 11498872 ~ 11503554 (+)
si:ch211-210c8.6 LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155 coding downstream 78087 11516644 ~ 11520131 (+)
LOC120558490 LOC102302598,LOC100690975 coding downstream 93642 11532199 ~ 11563315 (+)
cs cs coding downstream 125558 11564115 ~ 11579004 (+)
ankrd52a ankrd52 coding downstream 148321 11586878 ~ 11609087 (+)
G48763 NA non-coding upstream 207906 11230007 ~ 11230366 (+)
G48755 NA non-coding upstream 229638 11208287 ~ 11208634 (+)
G48680 NA non-coding upstream 477790 10907360 ~ 10960482 (+)
G48679 NA non-coding upstream 526200 10910143 ~ 10912072 (+)
G48671 LOC103365835,LOC104948831,LOC100710642 non-coding upstream 567195 10867858 ~ 10871077 (+)
G48805 csrnp2 non-coding downstream 20785 11459342 ~ 11459749 (+)
G48806 csrnp2 non-coding downstream 22591 11461148 ~ 11461976 (+)
G48807 NA non-coding downstream 24716 11463273 ~ 11464079 (+)
G48856 NA non-coding downstream 155706 11594263 ~ 11594475 (+)
G48859 NA non-coding downstream 164850 11603407 ~ 11603702 (+)
G48765 NA other upstream 122280 11314662 ~ 11315992 (+)
G48752 NA other upstream 264618 11172595 ~ 11173654 (+)
G48640 NA other upstream 687844 10614031 ~ 10750428 (+)
agmat agmat,LOC102790280 other upstream 1287021 10139598 ~ 10151251 (+)
ubxn10 NA other upstream 1513191 9922600 ~ 9925081 (+)
xkr5l xkr7,LOC103354446,LOC100690518 other downstream 645895 12084452 ~ 12090773 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other downstream 654222 12092779 ~ 12103899 (+)
nol4la LOC103354513,LOC100696587 other downstream 743652 12182209 ~ 12210409 (+)
trnae-cuc_14 NA other downstream 785010 12223567 ~ 12223638 (+)
LOC120559657 LOC102305201 other downstream 807088 12245645 ~ 12254060 (+)

Expression


Co-expression Network