Gene
RNA
| Item | Value |
|---|---|
| gene id | G48859 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 11603407 ~ 11603702 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU65244 | True | 296 | lncRNA | 0.45 | 1 | 11603407 | 11603702 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cs | cs | coding | upstream | 24403 | 11564115 ~ 11579004 (+) |
| LOC120558490 | LOC102302598,LOC100690975 | coding | upstream | 40092 | 11532199 ~ 11563315 (+) |
| si:ch211-210c8.6 | LOC103365959,LOC103139179,LOC106936181,LOC105935261,LOC100690432,LOC102797068,LOC102213155 | coding | upstream | 83276 | 11516644 ~ 11520131 (+) |
| dazap2 | dazap2 | coding | upstream | 99853 | 11498872 ~ 11503554 (+) |
| rapgef3 | LOC103365870 | coding | upstream | 221258 | 11352614 ~ 11382149 (+) |
| rnf41 | rnf41 | coding | downstream | 13173 | 11616875 ~ 11622841 (+) |
| dgkaa | LOC103366011 | coding | downstream | 21190 | 11624892 ~ 11647281 (+) |
| tamalin | grasp | coding | downstream | 44885 | 11648587 ~ 11660678 (+) |
| nr4a1 | nr4a1,LOC100709939 | coding | downstream | 82585 | 11686287 ~ 11691273 (+) |
| letmd1 | NA | coding | downstream | 102541 | 11706243 ~ 11712687 (+) |
| G48856 | NA | non-coding | upstream | 8932 | 11594263 ~ 11594475 (+) |
| G48807 | NA | non-coding | upstream | 139328 | 11463273 ~ 11464079 (+) |
| G48806 | csrnp2 | non-coding | upstream | 141431 | 11461148 ~ 11461976 (+) |
| G48805 | csrnp2 | non-coding | upstream | 143658 | 11459342 ~ 11459749 (+) |
| G48803 | NA | non-coding | upstream | 146533 | 11435044 ~ 11456874 (+) |
| G48860 | NA | non-coding | downstream | 17 | 11603719 ~ 11603984 (+) |
| G48854 | NA | non-coding | downstream | 95324 | 11699026 ~ 11699956 (+) |
| LOC120559500 | NA | non-coding | downstream | 109102 | 11712804 ~ 11720917 (+) |
| G48876 | NA | non-coding | downstream | 149296 | 11752998 ~ 11753237 (+) |
| LOC120559701 | slc13a3,LOC103399527 | non-coding | downstream | 256400 | 11860102 ~ 11862940 (+) |
| G48765 | NA | other | upstream | 287415 | 11314662 ~ 11315992 (+) |
| G48752 | NA | other | upstream | 429753 | 11172595 ~ 11173654 (+) |
| G48640 | NA | other | upstream | 852979 | 10614031 ~ 10750428 (+) |
| agmat | agmat,LOC102790280 | other | upstream | 1452156 | 10139598 ~ 10151251 (+) |
| ubxn10 | NA | other | upstream | 1678326 | 9922600 ~ 9925081 (+) |
| xkr5l | xkr7,LOC103354446,LOC100690518 | other | downstream | 480750 | 12084452 ~ 12090773 (+) |
| LOC120559364 | cables2,LOC103354454,LOC100695798 | other | downstream | 489077 | 12092779 ~ 12103899 (+) |
| nol4la | LOC103354513,LOC100696587 | other | downstream | 578507 | 12182209 ~ 12210409 (+) |
| trnae-cuc_14 | NA | other | downstream | 619865 | 12223567 ~ 12223638 (+) |
| LOC120559657 | LOC102305201 | other | downstream | 641943 | 12245645 ~ 12254060 (+) |
