G49157


Basic Information

Item Value
gene id G49157
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12364093 ~ 12364441 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65626
ggctgcattacagtaaagtgatgtcattttctgaacttaccagactgttctaactgttctattatttgcctttacccacttagtcattatatccacattactgatgattatttatcaaaaatctcattgtgtaattattttgtgaaagcaccaatagtcaacactacaatatcgttgcggtatcgatagagttatttggtcaaaaatatcgtgatatttgatatcgcccagccctacctcaGATTGTTCAAAATCCTTTGATATGATCTTTTCAGACTGAGGGGAATGGTAAAAGAGGGTAAAAGGGTTATTAAAATGAGAAACTTTTGAAGGACATCTTTTATTTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65626 True 349 lncRNA 0.34 1 12364093 12364441

Neighbor

gene id symbol gene type direction distance location
opn7d LOC104933009,LOC103354604 coding upstream 189 12351633 ~ 12363904 (+)
emilin3a NA coding upstream 16845 12343319 ~ 12347248 (+)
LOC120559656 gid8,LOC100691864,LOC107090700,LOC102225438,LOC105935248,LOC101169608,LOC101073127,LOC108231957,LOC103139083 coding upstream 120292 12241046 ~ 12243801 (+)
LOC120558724 NA coding upstream 222291 12129836 ~ 12141802 (+)
rap1aa LOC106952760,LOC107389464,LOC101074250,LOC103139095,LOC100690250,LOC107090729,LOC105935262,LOC102226994 coding upstream 281251 12068413 ~ 12082842 (+)
rad21l1 NA coding downstream 4355 12368796 ~ 12379697 (+)
LOC120558417 NA coding downstream 16591 12381032 ~ 12386273 (+)
pqbp1 pqbp1 coding downstream 134928 12499369 ~ 12504342 (+)
LOC120558783 LOC103354697 coding downstream 148813 12513254 ~ 12556372 (+)
iqsec2b iqsec2,LOC102793072,LOC103355372,LOC101076483 coding downstream 197370 12561811 ~ 12587368 (+)
G49106 NA non-coding upstream 141039 12220013 ~ 12223054 (+)
G49105 NA non-coding upstream 151578 12211744 ~ 12212515 (+)
G49094 NA non-coding upstream 217567 12146204 ~ 12146526 (+)
G49086 NA non-coding upstream 221566 12142142 ~ 12142527 (+)
G48978 NA non-coding upstream 381358 11953174 ~ 11982735 (+)
G49221 NA non-coding downstream 106009 12470450 ~ 12472272 (+)
G49223 NA non-coding downstream 109646 12474087 ~ 12476025 (+)
G49230 NA non-coding downstream 145601 12510042 ~ 12511578 (+)
G49241 LOC101072313 non-coding downstream 295986 12660427 ~ 12661371 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding downstream 309901 12674342 ~ 12677678 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 60690 12283427 ~ 12303403 (+)
LOC120559657 LOC102305201 other upstream 110033 12245645 ~ 12254060 (+)
trnae-cuc_14 NA other upstream 140455 12223567 ~ 12223638 (+)
nol4la LOC103354513,LOC100696587 other upstream 153684 12182209 ~ 12210409 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other upstream 260194 12092779 ~ 12103899 (+)
G49209 NA other downstream 88094 12452535 ~ 12458439 (+)
LOC120558314 porcn other downstream 287943 12652384 ~ 12658308 (+)
LOC120559236 LOC103354867 other downstream 430502 12794943 ~ 12844434 (+)
LOC120559134 dvl1 other downstream 496280 12860721 ~ 12886224 (+)
G49538 lmod3 other downstream 1167949 13532390 ~ 13534922 (+)

Expression


Co-expression Network