G49209


Basic Information

Item Value
gene id G49209
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12452535 ~ 12458439 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65687
CATATAATAAGAATACAGCAGAATTCTGGAGAgtcttatatttttttttctctgacttATCATTATCATAAATACTAATATGAATACATCATACACAATAAACACAGCACTATCCAAGGGCGTAGAGAGAGTATCACAAGACATCATTCACCACTAACGACAGAGTATATTTCATTTCAGCATATTTATAAGAGCtacagtgaaagagagagaaagacagagagagagagaagaaaaaacatgTGGGGAGGActagaggaagagagaaagccAGGTGCTTCTACACCGCCTGAATCAAATAAACctgataaaaaaatttaaaaaaagagtgaaTCCAAGGCTGTGCAATGGATCGATATATACGGGAGATGGACAACAATTCATCCCGATGAGGACTGTGGAAGCAAAACTACCAATCAAGACACATCTCTAACCATTTGGCAAACACGATCTTGTATATCCAAACAGAGGATTGGCAGTAGGATAGGTATTTATATCTGGATAAAGTAACTATTGCAGCACTTAACTTTGGGCTTTGAGTAGAATATAGCAGAGCTGCTGTATGTGCTGTGCCGTAAACACTATGATGGATCAAACATAGCACAGTATTACTGTGTAGTCTAACCTTCCTGCAGCTTTAAGCCTCAGCCTCTCAAATATGTGTAGGGATGCTTTAGGTTATAAGGATGCGTGCAGTAAATTCACCTTTAGAAACAGAAGGGATAAAGAAGGAAATTGAGGATGCAGGAGAAGTATATATGGAGACATATTGTTCAGATCgcctcataataataatatgtgtttAGTCCTTTAATATACTTTATTCTCATTTGCCTACAGTTAATGTTAACGTGAGTATGTACGTCACTGATTACAGTGTGATAGAATAGAAACACCAGTTAAAAAACTATATGACTCTGTCTTACAACTTTCCGGACCACATAACAGGTGATCAAAACAGGACGAGGATTCATTGACAACATTAGTTTGATCCCATTACATAAATccaaacaataaacaaacacacacgtcgCTAAATCTGTTGTTCACTGCCCCGATTCACAATTTTCATACTGATAGCACACTACAGCGGTTTCTGAAACAGCACAGCAAATATGAGATGCTACCATGCTCACTAATTTTCTTAACCTGATGCAATTTTTGATCTTATACGTCAGGATTTAAAATGTTGTGTGTATCAGAAGAGTTCATCCTCGCTTGATAGTGATATTTgatggaaaaatatatataaaaacataacgtTGAAACAAAATACTAAAAACCTGCTAACCACATATTCACTGTTATTACTATAAATGACTCTGCTCACTTTATATATTGataattctgtttttctttcaacatttgCCATCATATTTTTAGCAGCCCCCCCTTTTATAAAtctcaaatttaaaaaagtaaaaaaaaattttttatagaCTCTGAgatgaataaatgaaaacattatgGTATATGAATAATTTAAGGGGATTGAAGGGCAAAGGCTAAACTATGTGAGCTCCTAAACAGAACCAAAGTAAATGCAATTGAATAACTCTGTGCTCAACATTTGTTGTATAACAACTTTTATGGAGTGCACAATTATTCAACTGTGTACATATAATCATATATATCAGCATGTTGATATTTACACAGCACAGACAAATACATTCTCCCAAGTTAAATATTActacaattgttttttttctccataaatGTAAGTCTTTTCCATTACAAGATTTCTCTTAAATGTTCGTCAACGAATGTTTTGGTATTTGTATTCAAGTTTTTCTCGTATAACCAAACAGACAATCCTCTGTTGTCTTCTACAGTTAAATACATCACGAGAATAAACATCATGTTACAGCAAAGACCCATTTCCCCTGTGGTGTCCCCCTCCCCATGACCCCACCAGTTCCTGCCCTCCATGGCTCCCTCCCTCCGCCTGTCAActcacagatacacaaacagacaaacagaggagTGTGGAAATGCAGGCAGTGGTCGAGAGCCACACTCCAAAATCACAATGTCACCCATCCTGCAGCTGTGGTTTGACTGGACAGGCTCACATTTGATTAGAGTAGGAGGTGGGCTGCTGCTCATAGCCCTGACTGTATCCTCCTTCCTCAGTGTAGCCTCCCTGCTGGCCGTATTCAGGCTGGTACCCTCCCTGGGAGCCGGCGTAGGGGTCCTGCTGGGCATAGCCTCCCTGGTCAAAGGATTCAGGGGCGGGCTGCTTTTCTTGTGATGGGACGTATGTTCCAGAGAAGGCAGCCATCCAGCCGGTCTCCTTGAACACAAACCACAGGTTTCCTATCCACAGGATCAGGTTGATGAAACCAAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65687 True 2350 TUCP 0.39 2 12452535 12458439

Neighbor

gene id symbol gene type direction distance location
LOC120558417 NA coding upstream 66262 12381032 ~ 12386273 (+)
rad21l1 NA coding upstream 72838 12368796 ~ 12379697 (+)
opn7d LOC104933009,LOC103354604 coding upstream 88631 12351633 ~ 12363904 (+)
emilin3a NA coding upstream 105287 12343319 ~ 12347248 (+)
LOC120559656 gid8,LOC100691864,LOC107090700,LOC102225438,LOC105935248,LOC101169608,LOC101073127,LOC108231957,LOC103139083 coding upstream 208734 12241046 ~ 12243801 (+)
pqbp1 pqbp1 coding downstream 40930 12499369 ~ 12504342 (+)
LOC120558783 LOC103354697 coding downstream 54815 12513254 ~ 12556372 (+)
iqsec2b iqsec2,LOC102793072,LOC103355372,LOC101076483 coding downstream 103372 12561811 ~ 12587368 (+)
kdm5c kdm5c coding downstream 132468 12590907 ~ 12611168 (+)
LOC120559891 NA coding downstream 188097 12646536 ~ 12650775 (+)
G49157 NA non-coding upstream 88094 12364093 ~ 12364441 (+)
G49106 NA non-coding upstream 229481 12220013 ~ 12223054 (+)
G49105 NA non-coding upstream 240020 12211744 ~ 12212515 (+)
G49094 NA non-coding upstream 306009 12146204 ~ 12146526 (+)
G49086 NA non-coding upstream 310008 12142142 ~ 12142527 (+)
G49221 NA non-coding downstream 12011 12470450 ~ 12472272 (+)
G49223 NA non-coding downstream 15648 12474087 ~ 12476025 (+)
G49230 NA non-coding downstream 51603 12510042 ~ 12511578 (+)
G49241 LOC101072313 non-coding downstream 201988 12660427 ~ 12661371 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding downstream 215903 12674342 ~ 12677678 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 149132 12283427 ~ 12303403 (+)
LOC120559657 LOC102305201 other upstream 198475 12245645 ~ 12254060 (+)
trnae-cuc_14 NA other upstream 228897 12223567 ~ 12223638 (+)
nol4la LOC103354513,LOC100696587 other upstream 242126 12182209 ~ 12210409 (+)
LOC120559364 cables2,LOC103354454,LOC100695798 other upstream 348636 12092779 ~ 12103899 (+)
LOC120558314 porcn other downstream 193945 12652384 ~ 12658308 (+)
LOC120559236 LOC103354867 other downstream 336504 12794943 ~ 12844434 (+)
LOC120559134 dvl1 other downstream 402282 12860721 ~ 12886224 (+)
G49538 lmod3 other downstream 1073951 13532390 ~ 13534922 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 1200293 13658732 ~ 13724990 (+)

Expression


Co-expression Network