G49223


Basic Information

Item Value
gene id G49223
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12474087 ~ 12476025 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65703
ACCTCACAGGCTGCTCTGTTACAACGCTGACTCCTGCCAGCTCTGACCCTGGTCTCTGGTGCTCCTGCAGGCCCGTCACCTGCTCTGTGATCACGCCCCCGTTGGCTGCCTTGGGCTGAGGTTCCATGAGCACAGTTACCTGCTCTACCAGCGTGTCTATGGGCGACGCACTGGCGGGCTTTGTTTTCGAGGAGGTTCCCTGCTCGCTGTTGAATATGTCATCGCTGCCCATCTCTCCATCCACACcctcctcttcttccaggtCACAGGCCATCGCCAGACGCATCTCTGGAGCCAGGTCCTGCAGCGTCCGCAGCCCGAGCTGCAGAGAAGCCGCCCTGTCCTTCCTTTTGgatttcctctccctctcctttctcttgCGGAACTTTTTAAAATAGTCCTGAATCAAGAAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65703 True 416 lncRNA 0.58 2 12474087 12476025

Neighbor

gene id symbol gene type direction distance location
LOC120558417 NA coding upstream 87814 12381032 ~ 12386273 (+)
rad21l1 NA coding upstream 94390 12368796 ~ 12379697 (+)
opn7d LOC104933009,LOC103354604 coding upstream 110183 12351633 ~ 12363904 (+)
emilin3a NA coding upstream 126839 12343319 ~ 12347248 (+)
LOC120559656 gid8,LOC100691864,LOC107090700,LOC102225438,LOC105935248,LOC101169608,LOC101073127,LOC108231957,LOC103139083 coding upstream 230286 12241046 ~ 12243801 (+)
pqbp1 pqbp1 coding downstream 23344 12499369 ~ 12504342 (+)
LOC120558783 LOC103354697 coding downstream 37229 12513254 ~ 12556372 (+)
iqsec2b iqsec2,LOC102793072,LOC103355372,LOC101076483 coding downstream 85786 12561811 ~ 12587368 (+)
kdm5c kdm5c coding downstream 114882 12590907 ~ 12611168 (+)
LOC120559891 NA coding downstream 170511 12646536 ~ 12650775 (+)
G49221 NA non-coding upstream 1815 12470450 ~ 12472272 (+)
G49157 NA non-coding upstream 109646 12364093 ~ 12364441 (+)
G49106 NA non-coding upstream 251033 12220013 ~ 12223054 (+)
G49105 NA non-coding upstream 261572 12211744 ~ 12212515 (+)
G49094 NA non-coding upstream 327561 12146204 ~ 12146526 (+)
G49230 NA non-coding downstream 34017 12510042 ~ 12511578 (+)
G49241 LOC101072313 non-coding downstream 184402 12660427 ~ 12661371 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding downstream 198317 12674342 ~ 12677678 (+)
LOC120559802 NA non-coding downstream 250575 12726600 ~ 12732417 (+)
G49314 NA non-coding downstream 304590 12780615 ~ 12783788 (+)
G49209 NA other upstream 15648 12452535 ~ 12458439 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 170684 12283427 ~ 12303403 (+)
LOC120559657 LOC102305201 other upstream 220027 12245645 ~ 12254060 (+)
trnae-cuc_14 NA other upstream 250449 12223567 ~ 12223638 (+)
nol4la LOC103354513,LOC100696587 other upstream 263678 12182209 ~ 12210409 (+)
LOC120558314 porcn other downstream 176359 12652384 ~ 12658308 (+)
LOC120559236 LOC103354867 other downstream 318918 12794943 ~ 12844434 (+)
LOC120559134 dvl1 other downstream 384696 12860721 ~ 12886224 (+)
G49538 lmod3 other downstream 1056365 13532390 ~ 13534922 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 1182707 13658732 ~ 13724990 (+)

Expression


Co-expression Network