G49314


Basic Information

Item Value
gene id G49314
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12780615 ~ 12783788 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65847
accgatatggaTTATTTTTCATCAGCCGATACAGTTTGCcgattttcttgagccgatatttggagccgatactacttttgctccctcaatttacatcatacaaatgtaaaccctgccacactggatttgttttcggaatctgctctgccatttcttaatttcttaaaataataaacttctgcaatcatcttaacattcatatcacccaaattatgtgtgcaatgtgcagcATATTgatgggtgcactgcatatggttaactgcgAGGGTAAAAAgctttcatcaacatctacaacacagccttgatgatgcattgcttgctgacATAAGACCGATATAATCAggtcatcacaaaatgtcctttgtcaacacatttaaataatttaagaaaccaataaacctgaaaagtagccattgaaataaagtgcttgatttgtaatttaagactGCCACTCTGCTAGTGGTGGAGGGGCAGTGCACGGTCTGCACGTGAACTGCAGCGTCTCCAGCgacacagagctgcctgtggacgCCTCTCTGTAAATAATGCCGGGAAAAAAATATCGCCGAACGCATACATCGGCCCGATATATCGGGCCGGCCGATAAAATCGGTCTATCACTACCTTATGTTGAGTATGGATggattgtatatattttttaaacacctTATGGCATAATTGAATGTCAATTTAGTGATTATTTGCACCTCAACATTCCTGTTCAAGCTTTATAGATTTATGTGACACTTGAGGACAGAATGATATTTTCTCTCAATCTCAGTCATACAGGCTATTGATCCACAGACCACATTCCCATTAAGGAGTTGCAGggcttcctgtttcctgcaCTGAGCGGCTCCATCGGGTTTTCTTTGCACATCAACACCTCTTATGGCACACTGCTTGATGGCTGCATATTACATCCAGTGTTAAATCCTCTTCgggtatgtttttttcttttctttcttctttatcTTCCCTCGATAGATGTGAGTAGAATACAGGTCTTCATTTATTCACTGAAAATGCATTGAAATGCTTTCACAGAATCACATTAGCATCAATAAACATTTTAGGCTGTGTAGAATGAAAGTACGTGAGGAAATCTGAAGATTTAGAGCTTTAAAGACTTTTCTAATACCAGGTGTATTTTCTCAAATTGGAGTACCTTATATACTGTATCCTATTTACTGACAATACTGAATATTTGTTTGAGGAAATTGAGAAGAATGATtgattgtgttttattaatttcattcagagagagagagagagggtatcagttcattttttttttttttttttctttttgtgttacAGTATATCTCTGAGAGTAGGATTTCAGTATTAGTTGCATTTCCCTGATACCAGCATCCTGTTTTAGACTCTATGATACCCAGTGCCAGAAGGTATCAGCCCATATTGATTTGGGACTGCTGATCATTTTACATAGTTTTGAATTTTAATACACCAAAAAGACGAATGTTTGGAGGGTTGTTTTTCCTGCGATGTTTGTTTATTCTATTTAAGTAGTGTATTTGCGAGGTTGAGTGGTGTTTCAGTCTATTTCACGGCTGCCTGCCTTTAGTGAATAAGCCTGCACATGAGCAGCAGAAACTGCCAGgactaaaaaaaaattcaatgtgCTGAACTCTTTAAATGTGTATAATGTATTTGGCACGAAAGCCTAAAGCCCCAATTTAGTGAAAAACAAGTGAGTAggaatgaaaacattttacaaaTCCAGTTTTTATTATATACTGGAATATAGACTTGCTTTATTTGATAGATAAACTTGCACAGGACAGTCCTTAAAATGATTACACAGATTTTTAGTTTTCTAAAATCAGTCCCTCCTTTGCCAGTGATCTTCACCCACCCTCTCCTGGAAACCCTTCATCATCCTTCAGTGCCTCCATCCTGGATTTCTATACACAGCATGCCATCCATTCACAGTTCCATTTCTTCatccttttcctttttatctTTCTATCCCTCCACTTTTCCCTTTTCCATCCTCACTCCTTCATTTCCTCACCTGTAAATCTCCCAATTCTTTTCCACGTACAACCCTCCCTTCTTCACATCTTTATGCTTCCAGTTGAGTGCCTCCGTGTCTGTCGCTATGCGAGCCGTGGGAGGCTGCGGACTCCGATGATTTGTGTGCTCTGGCAGCCAGTCCCTCCACACAGCAGCCTCTTCTATTATTCAATGTAACGGGACCTTCACTTTTTACAGCTGAGCAATGTTCTCTGCTCAGTGTAGGAAGATTTGCCTGCTGCAGATGATATTTTTTCACCAGCAACAATAGAAGCCccacagagaaaacacagacTTACACGGTTTGTTTTACCCTATCATGACTCTTGCTCTTCTGCAAAACCATTATAAAATCACAACGTCTttgttaattcacgaggtttgAATTCCTTTTTTGGCCGAGCAACAAGAAAAAGGCAGATGGGCTCGTCCTGGTGGGGTTGGAAATCCTTGTTCTGGCTATAAAACGCAGAGTCTGGGAGGATGAGCGTTGGAGAGGGGCTGCAAGGCAGAAATTAATTGGCTCCTGCCAAAGTCCTGGAGTGGGGCAGTTTAAATTCACTGTTGTGTAATCATTAATCAGATCTCCCATGATAAGTCATTAGTTTGTAATGAATAAGGTTAAAACCCCAGTAGCCCAAATTTTTTTTGTAGCTATTTTGTCTCAAGGGAGATGTACAATTAATAACATGCCATACTCCTAAAGTTATCTGATTTAGTGGGAGTGATTATGTAGAACTGGATGTACAGTTAtgaaatatacagtatcaaGTTTACATTGTGAGGTTAACAAGTTTGTGATATGACGTCATACTGTAACAATGACAACTGCAAGAAAATGTATTCTGTATATTTTAGTACGTATTTGCACCAGATCCCAACTTTGAATTGTATGTGCAAGGACTTAAAAGCACGTGCAAAAATACACTAAATGGTGATAATGGTAAAAGAAAAATGGTTTAAAACTGCCAAGATGGTAATAAAGGCTGTGATGGACTTTAGTAAAAAACACAACCCCTTTTGTGTGCCTATACAATTATTTTAAAGTAATAATTTGTGAAATtttcatataaataaatgtatcagTGACATTTTTGAAAGTGAAATTCAAACAATGCTGAAATACCTATCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65847 True 3174 lncRNA 0.38 1 12780615 12783788

Neighbor

gene id symbol gene type direction distance location
nt5dc2 nt5dc2,LOC102799881 coding upstream 1374 12768809 ~ 12779241 (+)
zgc:162200 LOC103354841 coding upstream 14575 12744560 ~ 12766040 (+)
LOC120559796 LOC104924663,LOC103354782 coding upstream 58019 12708643 ~ 12722596 (+)
tspy LOC103354774 coding upstream 76526 12697896 ~ 12704089 (+)
wdr13 wdr13 coding upstream 110221 12662475 ~ 12670394 (+)
aurkaip1 aurkaip1,LOC102776880 coding downstream 61830 12845618 ~ 12847975 (+)
LOC120559133 mxra8 coding downstream 65024 12848812 ~ 12859392 (+)
tnfrsf9a NA coding downstream 108683 12892471 ~ 12896719 (+)
LOC120558505 LOC103354934,LOC104924675 coding downstream 127988 12911776 ~ 12920803 (+)
dnajc11a dnajc11,LOC104924676,LOC100696684,LOC102780517 coding downstream 439205 13222993 ~ 13235009 (+)
LOC120559802 NA non-coding upstream 48198 12726600 ~ 12732417 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding upstream 102937 12674342 ~ 12677678 (+)
G49241 LOC101072313 non-coding upstream 119244 12660427 ~ 12661371 (+)
G49230 NA non-coding upstream 269037 12510042 ~ 12511578 (+)
G49223 NA non-coding upstream 304590 12474087 ~ 12476025 (+)
G49330 NA non-coding downstream 44793 12828581 ~ 12840565 (+)
G49334 NA non-coding downstream 137217 12921005 ~ 12928180 (+)
G49346 NA non-coding downstream 144468 12928256 ~ 12928471 (+)
G49461 NA non-coding downstream 523052 13306840 ~ 13307572 (+)
G49474 NA non-coding downstream 581943 13365731 ~ 13378409 (+)
LOC120558314 porcn other upstream 122307 12652384 ~ 12658308 (+)
G49209 NA other upstream 322176 12452535 ~ 12458439 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 477212 12283427 ~ 12303403 (+)
LOC120559657 LOC102305201 other upstream 526555 12245645 ~ 12254060 (+)
trnae-cuc_14 NA other upstream 556977 12223567 ~ 12223638 (+)
LOC120559236 LOC103354867 other downstream 11155 12794943 ~ 12844434 (+)
LOC120559134 dvl1 other downstream 76933 12860721 ~ 12886224 (+)
G49538 lmod3 other downstream 748602 13532390 ~ 13534922 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 874944 13658732 ~ 13724990 (+)
hmga1a hmga1,LOC103355299 other downstream 1329227 14113015 ~ 14121022 (+)

Expression


Co-expression Network