G49346


Basic Information

Item Value
gene id G49346
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12928256 ~ 12928471 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU65887
gagaaagagagagagagagagagcgagcgagagagagagaggtacgAACTGAGTTGCTGAGGCTGCACTCACCCGCTTGAACAGTCTATGGTCCATCAAGGGGCTTGGCATAAACAGCAAAACAATACCAGACAGCTATTAGCACACAGTAGGCACTGTGAGGGAGGGGGCGAGGACAGGTGGGGGCCAAATACAGTGAGGGGGAGGGGGTGGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65887 True 216 lncRNA 0.56 1 12928256 12928471

Neighbor

gene id symbol gene type direction distance location
LOC120558505 LOC103354934,LOC104924675 coding upstream 7453 12911776 ~ 12920803 (+)
tnfrsf9a NA coding upstream 31537 12892471 ~ 12896719 (+)
LOC120559133 mxra8 coding upstream 68864 12848812 ~ 12859392 (+)
aurkaip1 aurkaip1,LOC102776880 coding upstream 80281 12845618 ~ 12847975 (+)
nt5dc2 nt5dc2,LOC102799881 coding upstream 149015 12768809 ~ 12779241 (+)
dnajc11a dnajc11,LOC104924676,LOC100696684,LOC102780517 coding downstream 294522 13222993 ~ 13235009 (+)
LOC120558583 NA coding downstream 308999 13237470 ~ 13243293 (+)
LOC120558998 LOC104924681,LOC104961357 coding downstream 327376 13255847 ~ 13259321 (+)
lemd1 NA coding downstream 344095 13272566 ~ 13284251 (+)
pm20d1.2 pm20d1 coding downstream 355910 13284381 ~ 13292312 (+)
G49334 NA non-coding upstream 76 12921005 ~ 12928180 (+)
G49330 NA non-coding upstream 87691 12828581 ~ 12840565 (+)
G49314 NA non-coding upstream 144468 12780615 ~ 12783788 (+)
LOC120559802 NA non-coding upstream 195839 12726600 ~ 12732417 (+)
G49301 gpr173,LOC107086794,LOC102204197,LOC101466594,LOC108231911 non-coding upstream 250578 12674342 ~ 12677678 (+)
G49461 NA non-coding downstream 378369 13306840 ~ 13307572 (+)
G49474 NA non-coding downstream 437260 13365731 ~ 13378409 (+)
G49502 NA non-coding downstream 504128 13432599 ~ 13433217 (+)
G49508 NA non-coding downstream 516668 13445139 ~ 13446735 (+)
G49562 NA non-coding downstream 688406 13616877 ~ 13641874 (+)
LOC120559134 dvl1 other upstream 42032 12860721 ~ 12886224 (+)
LOC120559236 LOC103354867 other upstream 83822 12794943 ~ 12844434 (+)
LOC120558314 porcn other upstream 269948 12652384 ~ 12658308 (+)
G49209 NA other upstream 469817 12452535 ~ 12458439 (+)
si:dkey-70p6.1 LOC100692404,LOC101477341 other upstream 624853 12283427 ~ 12303403 (+)
G49538 lmod3 other downstream 603919 13532390 ~ 13534922 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other downstream 730261 13658732 ~ 13724990 (+)
hmga1a hmga1,LOC103355299 other downstream 1184544 14113015 ~ 14121022 (+)
uhrf1bp1 uhrf1bp1 other downstream 1277126 14205597 ~ 14227888 (+)
G49773 LOC103358639 other downstream 1636396 14564867 ~ 14567456 (+)

Expression


Co-expression Network