G49591


Basic Information

Item Value
gene id G49591
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13749558 ~ 13750842 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66244
ctcctcttcctctgctttGTGGCTCTCCTCTTCATGTGCTTCCTGGTTCTCCTCTTCAGGCTCTTCTTCACTTTGTTCCCCGTCTGCTGTCTTTTCTGATAAAGCAACCGACTCGTCCTGCTCTGTCTGGTCCTCCTCTACTGCCTCCACCTCCTCTGTCACAGAGTCCTCCTGCTCCACACCATCTTCATCCTCCGCAGCTGCCTCTCCTTCACTGGCCTCTGCTCCTTCATCTGCCTCTGCCTCATCTTCTGGGTTGGATGCCTCTTGTTCTACATCTGCAGGAGCTGCCTCTTCTTCAGCTGTTGCAGCTGCCTCTTCTTCAGCTGCAGGGGCTTTCTCTTCTTCCCCTGCTGCAGCTTCCTCTTCTTCGGCTGCAGGAGCTTCCTCTTCTTCGGCTGcagcttcctcttcttctgctgctgcagcttcttcttcttctgcagcttcttcttgttcttcggCTGCAGTAGCTTCCTCTTCTTCGGCTGCTGCAGCTTCTTCTTCGGCTGCTGCAGCTGCCTCTTCTTTGGCTGCGAGAGCAGCCTCTGCTTCAGCTGCAGGAGCAGCCTCTTCCTCAGCTGCAGGGGCTTCCTCTTCCTCAGCTGCAGGGACTTCCTCTTCTTCGGCTGCGGAAGctgtctcttcctctgtctgtccCACCGGCATTGAGCTGCTCCTCCACACTGGCCTGCTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66244 True 700 lncRNA 0.56 3 13749558 13750842

Neighbor

gene id symbol gene type direction distance location
oard1 oard1,LOC106909399 coding upstream 92182 13655553 ~ 13657376 (+)
guca1b guca1b coding upstream 94898 13652368 ~ 13654660 (+)
LOC120559296 ppp4r2 coding upstream 99662 13642629 ~ 13649896 (+)
LOC120559547 mitf coding upstream 144123 13564625 ~ 13605435 (+)
LOC120559207 arl6ip5,LOC102786473,LOC101476305,LOC101073283 coding upstream 218070 13527308 ~ 13531488 (+)
LOC120558708 pacsin1,LOC102311157,LOC102795192,LOC103372886,LOC102200946,LOC107391251,LOC104932789 coding downstream 394385 14145227 ~ 14185140 (+)
LOC120558842 anks1a coding downstream 480293 14231135 ~ 14305611 (+)
LOC120559736 NA coding downstream 557120 14307962 ~ 14317786 (+)
scube3 scube3 coding downstream 574960 14325802 ~ 14402540 (+)
pcbp2 LOC103358643,LOC100702237,LOC101072611,LOC101159823,LOC103144045,LOC107094832,LOC107391117,LOC101487433 coding downstream 780312 14531154 ~ 14539601 (+)
G49585 LOC103355245,LOC104927444,LOC101062607 non-coding upstream 17309 13725088 ~ 13732249 (+)
G49562 NA non-coding upstream 107684 13616877 ~ 13641874 (+)
G49572 NA non-coding upstream 110465 13636866 ~ 13639093 (+)
G49508 NA non-coding upstream 302823 13445139 ~ 13446735 (+)
G49502 NA non-coding upstream 316341 13432599 ~ 13433217 (+)
LOC120558703 NA non-coding downstream 7745 13758587 ~ 13992115 (+)
G49598 NA non-coding downstream 13717 13764559 ~ 13766112 (+)
LOC120558704 NA non-coding downstream 28425 13779267 ~ 13798652 (+)
G49619 NA non-coding downstream 372810 14123652 ~ 14124536 (+)
G49663 NA non-coding downstream 472453 14223295 ~ 14223723 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 24568 13658732 ~ 13724990 (+)
G49538 lmod3 other upstream 214636 13532390 ~ 13534922 (+)
LOC120559134 dvl1 other upstream 863334 12860721 ~ 12886224 (+)
LOC120559236 LOC103354867 other upstream 905124 12794943 ~ 12844434 (+)
LOC120558314 porcn other upstream 1091250 12652384 ~ 12658308 (+)
hmga1a hmga1,LOC103355299 other downstream 362173 14113015 ~ 14121022 (+)
uhrf1bp1 uhrf1bp1 other downstream 454755 14205597 ~ 14227888 (+)
G49773 LOC103358639 other downstream 814025 14564867 ~ 14567456 (+)
G49776 NA other downstream 823700 14574542 ~ 14577572 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 2021375 15772217 ~ 15798957 (+)

Expression


Co-expression Network