G49598


Basic Information

Item Value
gene id G49598
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13764559 ~ 13766112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66253
CTTGTCTTTTACGCCTTGAATGTGTGGCAGTGCCAGTTGCGTCTTCAGTCTCGTCACCCTTACTGTGGTTTTCAGGACCTGTActttcacCGTTGACTGTTTTCTGTGGCTGCTGGCTTTGCTTTGAACAACTTGAATGCTTGACCTGGCCGGTAGAGTCCTCATTCTCATCACTGTCACTTGCTGCATCCTCACTTCCTTCATTGTCACTTGCTCGTCCATTTGGATCTTGCTCAGATGCATGTTGTTTCCATTGGACCTTCATTGTGCGCCTTTGATGTGTGATGGACCCAGTAGAGTCTTTATTTCCATAAGAATCAGCCACTTCATTTTGACTTGTGGCGAATGTTTGAATCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66253 True 358 lncRNA 0.46 3 13764559 13766112

Neighbor

gene id symbol gene type direction distance location
oard1 oard1,LOC106909399 coding upstream 107183 13655553 ~ 13657376 (+)
guca1b guca1b coding upstream 109899 13652368 ~ 13654660 (+)
LOC120559296 ppp4r2 coding upstream 114663 13642629 ~ 13649896 (+)
LOC120559547 mitf coding upstream 159124 13564625 ~ 13605435 (+)
LOC120559207 arl6ip5,LOC102786473,LOC101476305,LOC101073283 coding upstream 233071 13527308 ~ 13531488 (+)
LOC120558708 pacsin1,LOC102311157,LOC102795192,LOC103372886,LOC102200946,LOC107391251,LOC104932789 coding downstream 379115 14145227 ~ 14185140 (+)
LOC120558842 anks1a coding downstream 465023 14231135 ~ 14305611 (+)
LOC120559736 NA coding downstream 541850 14307962 ~ 14317786 (+)
scube3 scube3 coding downstream 559690 14325802 ~ 14402540 (+)
pcbp2 LOC103358643,LOC100702237,LOC101072611,LOC101159823,LOC103144045,LOC107094832,LOC107391117,LOC101487433 coding downstream 765042 14531154 ~ 14539601 (+)
G49591 NA non-coding upstream 13717 13749558 ~ 13750842 (+)
G49585 LOC103355245,LOC104927444,LOC101062607 non-coding upstream 32310 13725088 ~ 13732249 (+)
G49562 NA non-coding upstream 122685 13616877 ~ 13641874 (+)
G49572 NA non-coding upstream 125466 13636866 ~ 13639093 (+)
G49508 NA non-coding upstream 317824 13445139 ~ 13446735 (+)
LOC120558704 NA non-coding downstream 13155 13779267 ~ 13798652 (+)
G49619 NA non-coding downstream 357540 14123652 ~ 14124536 (+)
G49663 NA non-coding downstream 457183 14223295 ~ 14223723 (+)
G49660 NA non-coding downstream 462258 14228370 ~ 14229092 (+)
G49665 NA non-coding downstream 463533 14229645 ~ 14230394 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 39569 13658732 ~ 13724990 (+)
G49538 lmod3 other upstream 229637 13532390 ~ 13534922 (+)
LOC120559134 dvl1 other upstream 878335 12860721 ~ 12886224 (+)
LOC120559236 LOC103354867 other upstream 920125 12794943 ~ 12844434 (+)
LOC120558314 porcn other upstream 1106251 12652384 ~ 12658308 (+)
hmga1a hmga1,LOC103355299 other downstream 346903 14113015 ~ 14121022 (+)
uhrf1bp1 uhrf1bp1 other downstream 439485 14205597 ~ 14227888 (+)
G49773 LOC103358639 other downstream 798755 14564867 ~ 14567456 (+)
G49776 NA other downstream 808430 14574542 ~ 14577572 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 2006105 15772217 ~ 15798957 (+)

Expression


Co-expression Network