G49619


Basic Information

Item Value
gene id G49619
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14123652 ~ 14124536 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66277
ATTTGTACCACCAGGAGTATCAGATGAACTTCAGAAGCAGCTAAGTTTCtatgtggaggaggaagtgacTAACCAATTGAGGAACTGGTATGCTGTTAGAGTGAATGGTGCAACCAAAGACAACCACAtcgttggaaaaaaaaaaaatacactgagAGAAAACAAGTCAACAGTAGACATGTCTTTTGTGGAAAATGTGGTCAGTTGTATTAAGATCTGACATGTTTAATCCAGCCCTCTACATTTAGAAAGAATGTATACAGTCCTTATGGTAGCATTAATTGAAAGAGGTTTCTCATGCTAACTGGACTCAGCAATACATTTTCTAAGTAATAATGTTGCGATCTTCTTTTGATTTCACAATGACAACTTGTCCCACTTGCAGTTAGAAAATGTCAGTTTGACAAGAAATGGTGCATCATACCCTTGTGTCCTCCTCTCTCCACAACATTTCTTGCTCAGCTTCATTAAGTTCCTCTGATGGATCATATGTGTAAACTGGTAACAGCTGATGACGAAGTCTGTCAATTCTGTGggacaaaatgaaataaatcaaaC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66277 True 558 lncRNA 0.38 2 14123652 14124536

Neighbor

gene id symbol gene type direction distance location
oard1 oard1,LOC106909399 coding upstream 466276 13655553 ~ 13657376 (+)
guca1b guca1b coding upstream 468992 13652368 ~ 13654660 (+)
LOC120559296 ppp4r2 coding upstream 473756 13642629 ~ 13649896 (+)
LOC120559547 mitf coding upstream 518217 13564625 ~ 13605435 (+)
LOC120559207 arl6ip5,LOC102786473,LOC101476305,LOC101073283 coding upstream 592164 13527308 ~ 13531488 (+)
LOC120558708 pacsin1,LOC102311157,LOC102795192,LOC103372886,LOC102200946,LOC107391251,LOC104932789 coding downstream 20691 14145227 ~ 14185140 (+)
LOC120558842 anks1a coding downstream 106599 14231135 ~ 14305611 (+)
LOC120559736 NA coding downstream 183426 14307962 ~ 14317786 (+)
scube3 scube3 coding downstream 201266 14325802 ~ 14402540 (+)
pcbp2 LOC103358643,LOC100702237,LOC101072611,LOC101159823,LOC103144045,LOC107094832,LOC107391117,LOC101487433 coding downstream 406618 14531154 ~ 14539601 (+)
LOC120558703 NA non-coding upstream 131537 13758587 ~ 13992115 (+)
LOC120558704 NA non-coding upstream 325000 13779267 ~ 13798652 (+)
G49598 NA non-coding upstream 357540 13764559 ~ 13766112 (+)
G49591 NA non-coding upstream 372810 13749558 ~ 13750842 (+)
G49585 LOC103355245,LOC104927444,LOC101062607 non-coding upstream 391403 13725088 ~ 13732249 (+)
G49663 NA non-coding downstream 98759 14223295 ~ 14223723 (+)
G49660 NA non-coding downstream 103834 14228370 ~ 14229092 (+)
G49665 NA non-coding downstream 105109 14229645 ~ 14230394 (+)
G49718 NA non-coding downstream 278170 14402706 ~ 14403546 (+)
G49717 NA non-coding downstream 279359 14403895 ~ 14409162 (+)
hmga1a hmga1,LOC103355299 other upstream 2630 14113015 ~ 14121022 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 398662 13658732 ~ 13724990 (+)
G49538 lmod3 other upstream 588730 13532390 ~ 13534922 (+)
LOC120559134 dvl1 other upstream 1237428 12860721 ~ 12886224 (+)
LOC120559236 LOC103354867 other upstream 1279218 12794943 ~ 12844434 (+)
uhrf1bp1 uhrf1bp1 other downstream 81061 14205597 ~ 14227888 (+)
G49773 LOC103358639 other downstream 440331 14564867 ~ 14567456 (+)
G49776 NA other downstream 450006 14574542 ~ 14577572 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 1647681 15772217 ~ 15798957 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other downstream 1651681 15776217 ~ 15867369 (+)

Expression


Co-expression Network