G49660


Basic Information

Item Value
gene id G49660
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14228370 ~ 14229092 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66333
GCAatttaaaacatactgtatttacaaCCATAATACATAACAGAATTTCACACCATTTGCACTGTATGTTGCATCAAGTATTTACCTTAAAAATTAGAGGTGAATGGCAGGTCATAGTGGAGTTTCTACTGCTGCCTTTATGTAAGAGACCCACTTGATCTTGTCTGTATTGACCATTCTCCAACACTACAGTCACTGATCTTGACTGGTTTGTAGAAAACAATTGTGTCTAGTCAGCTGCACAGGGTATGGCACCATTTATTTAATTGGCATTTAAGGCATGCTCCCCATACAACCTAAAGCACAGGTGCCTCAGTTGAAGAGTATTTGCTTGTACTTGGTGTTGGGAATCTGATCTCTGCTCTTTAACCTCCTCACTGCTTCTCTCATGTGCTTGGGCTGAAGCGGTGGTGTGTCTCCCCACTTCTCACAAACGTCCAACGCTCAACAATTTCCCCagcaaaaactttggaaatacCAGACATGGCAATCACCACATTCTGGGACACTGACGATCCTGTTATGGACTGGATCAGctagaaaatggaaaaaaaaggacatCAATAAAATAGTTCcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66333 True 578 lncRNA 0.41 2 14228370 14229092

Neighbor

gene id symbol gene type direction distance location
LOC120558708 pacsin1,LOC102311157,LOC102795192,LOC103372886,LOC102200946,LOC107391251,LOC104932789 coding upstream 43230 14145227 ~ 14185140 (+)
oard1 oard1,LOC106909399 coding upstream 570994 13655553 ~ 13657376 (+)
guca1b guca1b coding upstream 573710 13652368 ~ 13654660 (+)
LOC120559296 ppp4r2 coding upstream 578474 13642629 ~ 13649896 (+)
LOC120559547 mitf coding upstream 622935 13564625 ~ 13605435 (+)
LOC120558842 anks1a coding downstream 2043 14231135 ~ 14305611 (+)
LOC120559736 NA coding downstream 78870 14307962 ~ 14317786 (+)
scube3 scube3 coding downstream 96710 14325802 ~ 14402540 (+)
pcbp2 LOC103358643,LOC100702237,LOC101072611,LOC101159823,LOC103144045,LOC107094832,LOC107391117,LOC101487433 coding downstream 302062 14531154 ~ 14539601 (+)
aaas aaas coding downstream 323141 14552233 ~ 14561394 (+)
G49663 NA non-coding upstream 4647 14223295 ~ 14223723 (+)
G49619 NA non-coding upstream 103834 14123652 ~ 14124536 (+)
LOC120558703 NA non-coding upstream 236255 13758587 ~ 13992115 (+)
LOC120558704 NA non-coding upstream 429718 13779267 ~ 13798652 (+)
G49598 NA non-coding upstream 462258 13764559 ~ 13766112 (+)
G49665 NA non-coding downstream 553 14229645 ~ 14230394 (+)
G49718 NA non-coding downstream 173614 14402706 ~ 14403546 (+)
G49717 NA non-coding downstream 174803 14403895 ~ 14409162 (+)
G49720 NA non-coding downstream 182275 14411367 ~ 14417663 (+)
G49743 NA non-coding downstream 289682 14518774 ~ 14525189 (+)
uhrf1bp1 uhrf1bp1 other upstream 482 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 107348 14113015 ~ 14121022 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 503380 13658732 ~ 13724990 (+)
G49538 lmod3 other upstream 693448 13532390 ~ 13534922 (+)
LOC120559134 dvl1 other upstream 1342146 12860721 ~ 12886224 (+)
G49773 LOC103358639 other downstream 335775 14564867 ~ 14567456 (+)
G49776 NA other downstream 345450 14574542 ~ 14577572 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 1543125 15772217 ~ 15798957 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other downstream 1547125 15776217 ~ 15867369 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 1656898 15885990 ~ 15969331 (+)

Expression


Co-expression Network