G50002


Basic Information

Item Value
gene id G50002
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 15276113 ~ 15276360 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66801
gttatgaggtcataacaagcaaggttacctcccctttctctgctttgcccgcccagagaatttggccaacccatgagagagagagacatcatggctttcaaacgagaaaagtggcagttggtcaaggccacacccccaccctccaccttgccactcccactctcctcctcaatagcttcagacacagaaatggcacatactaaggaaagctcattgtgggactggctctagtggctgtagttctgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66801 True 248 lncRNA 0.51 1 15276113 15276360

Neighbor

gene id symbol gene type direction distance location
kcnk15 LOC104919657,LOC103357353,LOC104951678,LOC100707244 coding upstream 160929 15088421 ~ 15115184 (+)
LOC120559274 NA coding upstream 199168 15071921 ~ 15076945 (+)
si:ch73-181d5.4 NA coding upstream 205700 15032707 ~ 15070413 (+)
LOC120559459 NA coding upstream 243553 15012216 ~ 15032560 (+)
LOC120558693 cdh4,LOC100707506,LOC101477622 coding downstream 99051 15375411 ~ 15637423 (+)
lsm14b NA coding downstream 405897 15682257 ~ 15686191 (+)
LOC120559909 ss18l1,LOC102784650 coding downstream 410965 15687325 ~ 15696878 (+)
mtg2 mtg2 coding downstream 420919 15697279 ~ 15700376 (+)
spo11 spo11,LOC103368783 coding downstream 556823 15833183 ~ 15840777 (+)
LOC120559279 NA non-coding upstream 34986 15207742 ~ 15241127 (+)
G49883 NA non-coding upstream 305310 14902916 ~ 14970803 (+)
G49778 LOC102302837,LOC101485799,LOC100702507,LOC103358639,LOC104919652,LOC103385584,LOC106524244 non-coding upstream 685337 14585449 ~ 14590776 (+)
G49775 LOC107731244 non-coding upstream 706516 14568325 ~ 14569597 (+)
G49764 NA non-coding upstream 724554 14551310 ~ 14551559 (+)
G50003 NA non-coding downstream 1086 15277446 ~ 15277646 (+)
G50014 NA non-coding downstream 145959 15422319 ~ 15422608 (+)
G50011 NA non-coding downstream 361123 15637483 ~ 15639301 (+)
G50017 NA non-coding downstream 390889 15667249 ~ 15669544 (+)
G50029 NA non-coding downstream 428736 15705096 ~ 15705468 (+)
G49776 NA other upstream 698541 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 708657 14564867 ~ 14567456 (+)
uhrf1bp1 uhrf1bp1 other upstream 1048225 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 1155091 14113015 ~ 14121022 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 1551123 13658732 ~ 13724990 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 495857 15772217 ~ 15798957 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other downstream 499857 15776217 ~ 15867369 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 609630 15885990 ~ 15969331 (+)
LOC120559121 NA other downstream 1027952 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 1046461 16322821 ~ 16379645 (+)

Expression


Co-expression Network