G50017


Basic Information

Item Value
gene id G50017
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 15667249 ~ 15669544 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU66817
agatatttacatataaaCAGGTGGCTGTGCAAAATGTACAAGATATTGGCAAGAAAGTGTCATATGTCTTATTTGTCATATCCACTGTATATGAAAGATAAAATAAATCTGCTGAGTTGGAAGTTGTCAACTGATAAACTTACAAACAGCAAacttaaatatatacagtaataaaaaaagttgcCAATACAGAttctttcagaaaatgacaaaGGTATAAAGACCAAAATTAGTATGTGcactaaaaatataaaaagttatAAAGTGAGTATGTTCATCTGATCGACTAGTTTTAGAAAAGTGATCTGTCAAAGTGCAGTCCTCGTTCTGCATTTCATGCCCATGTTTACCAATATGATCATCCTCCATCAttcataaatataaaaatttgGAAAAACTACTTTTTGGAAAATGTGTGATTCACATAAATGACTGTAATCAATAACATTATTGGGATTCATTTCTCCAaactcctttttttaaattcacattATAGCCCATGAGCTACACAGCCTGGATACTTTACATTACTAACAGCCACTTAATTTCCCCAATTATACCATACTAgtttcaatgtttttatttatttagccaaCCATTTCCATTATCTTTTTATTGGTACAAAAAGCAAAGACTAAAATGTGCTTGAGATGTGCAATCCATCCTGCACAAAGATATTTTAGTCAAAGCTTACTTAAACATTACACACTTTCATTTGAAAAGTCTGCAGCTCTTTGGGGGACATTTAGGAAACGCAGGGAAATGACGTAAAAGCCTCTTGGTGACATTATTCAAAAAACACAGAGCCAAATccacattattattttcataataatTATGTAAATCTTTCATTATTCTTGGATCTTCTAAATCAGAGGACAACAAGCACATTTAACACACCAGAAAATCTGCAGACTTTTGAAATCTATTTGGCAATGATAAAGTGGTGAACAACAACTACTTTGGAAAGGATGTTCACTGGGACATAAGGTACAGTTCTTGAAGTTAAATTGTATATTGTCACTAAAGAAATTAATGAAAACGGCTGACTGCAGGGGAGGTGGCTTTAGAAATGATCGATAGGAATGTAAAGGGCATGTCTTCTTTGTAGTAAATGTGCTAGTATCTGAATAAAAAGTGGAATTTCGGTTTCAACCACCGTGTCGGGAACTCTCACAATAAATAATATAGTTGCAAGAGTTCAAATACAACACCTGTGATTACATCATGCACAACACATGACATAAACAATAATTTTTTGTTTCCAATCAAGctaagacaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagagcacAACAAAACGATGTAGCACACATCCTACAAATCTGGAGAGAACTGTTGGACAGATGATGTTACTGAAGCAGATCAACACATTCTAATCCATATGGCTTAATTTGTTAAGAAGGCAACTCAGCAGATGACAAGGCTAGTCAAGGTTACTCTCTGTAAAACAATCCACAGGCATTAAAACTGTGCTAAAATATAGTATAAATGTGTGATAAATTAAAATCTCTGTTAAGAACTTAAATAAACAGAGTTTTTACGTTAACATGGTCAAGAAAATTAGCACATTACTGCAGTTTTGTAAAATCAGGCTGTTGCACCTGAGTGTCCCACATTAATCTAAAATGAAACCACTTCAAAGAGATTTGCTGCTACAACACGCATGTCAGAGGAAGTGACACTGACAAGGTCTTCAGTTCTATAGCGCTCAGTTGGGTTAAAGACATTTTCCTCGTGTGCAGCATGAGGCAGTGCATGACTGAAGCGTGGTTGGGTAAAACTGGTCTCTAAAGAGCAAAGCCGAGCTGAGAGGCACACTGAAATCAGGGCCCAGTTCAAATTTTTGCTCCTCTGAAAAATACCAAAGACCTGTGCTTGAAGAGGCTTTTAAAAGAAGACGTCCTTTCGGCGCCCAGATCATTTTCTTCCCACAGACCGACGTCTCGTCACTCAGTAGTGGGTGATCACAGAAAGTACCGGCAGAGACGGTCTGAGCTGACAGTCAACTCTGCTTCTTGAACGCCACTGAGCGACACTAGTCATTTTAATGCGGGTGCTATTTGAGGAAGCCTTTATAGAGCAGGTGGGAGTGACTggtccctctttcattctccAGGCAGAAGAGCAGGTCCCTGAGGTTGACTCTGGTGATGCGCTGTCGCATAAACTGTCTGGAGCCTGCTCCACCGGAGCCTCCAGGCTGAGAGGGGCCTGACCCTGAG
>TU66818
agatatttacatataaaCAGGTGGCTGTGCAAAATGTACAAGATATTGGCAAGAAAGTGTCATATGTCTTATTTGTCATATCCACTGTATATGAAAGATAAAATAAATCTGCTGAGTTGGAAGTTGTCAACTGATAAACTTACAAACAGCAAacttaaatatatacagtaataaaaaaagttgcCAATACAGAttctttcagaaaatgacaaaGGTATAAAGACCAAAATTAGTATGTGcactaaaaatataaaaagttatAAAGTGAGTATGTTCATCTGATCGACTAGTTTTAGAAAAGTGATCTGTCAAAGTGCAGTCCTCGTTCTGCATTTCATGCCCATGTTTACCAATATGATCATCCTCCATCAttcataaatataaaaatttgGAAAAACTACTTTTTGGAAAATGTGTGATTCACATAAATGACTGTAATCAATAACATTATTGGGATTCATTTCTCCAaactcctttttttaaattcacattATAGCCCATGAGCTACACAGCCTGGATACTTTACATTACTAACAGCCACTTAATTTCCCCAATTATACCATACTAgtttcaatgtttttatttatttagccaaCCATTTCCATTATCTTTTTATTGGTACAAAAAGCAAAGACTAAAATGTGCTTGAGATGTGCAATCCATCCTGCACAAAGATATTTTAGTCAAAGCTTACTTAAACATTACACACTTTCATTTGAAAAGTCTGCAGCTCTTTGGGGGACATTTAGGAAACGCAGGGAAATGACGTAAAAGCCTCTTGGTGACATTATTCAAAAAACACAGAGCCAAATccacattattattttcataataatTATGTAAATCTTTCATTATTCTTGGATCTTCTAAATCAGAGGACAACAAGCACATTTAACACACCAGAAAATCTGCAGACTTTTGAAATCTATTTGGCAATGATAAAGTGGTGAACAACAACTACTTTGGAAAGGATGTTCACTGGGACATAAGGTACAGTTCTTGAAGTTAAATTGTATATTGTCACTAAAGAAATTAATGAAAACGGCTGACTGCAGGGGAGGTGGCTTTAGAAATGATCGATAGGAATGTAAAGGGCATGTCTTCTTTGTAGTAAATGTGCTAGTATCTGAATAAAAAGTGGAATTTCGGTTTCAACCACCGTGTCGGGAACTCTCACAATAAATAATATAGTTGCAAGAGTTCAAATACAACACCTGTGATTACATCATGCACAACACATGACATAAACAATAATTTTTTGTTTCCAATCAAGctaagacaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagagcacAACAAAACGATGTAGCACACATCCTACAAATCTGGAGAGAACTGTTGGACAGATGATGTTACTGAAGCAGATCAACACATTCTAATCCATATGGCTTAATTTGTTAAGAAGGCAACTCAGCAGATGACAAGGCTAGTCAAGGTTACTCTCTGTAAAACAATCCACAGGCATTAAAACTGTGCTAAAATATAGTATAAATGTGTGATAAATTAAAATCTCTGTTAAGAACTTAAATAAACAGAGTTTTTACGTTAACATGGTCAAGAAAATTAGCACATTACTGCAGTTTTGTAAAATCAGGCTGTTGCACCTGAGTGTCCCACATTAATCTAAAATGAAACCACTTCAAAGAGATTTGCTGCTACAACACGCATGTCAGAGGAAGTGACACTGACAAGGTCTTCAGTTCTATAGCGCTCAGTTGGGTTAAAGACATTTTCCTCGTGTGCAGCATGAGGCAGTGCATGACTGAAGCGTGGTTGGGTAAAACTGGTCTCTAAAGAGCAAAGCCGAGCTGAGAGGCACACTGAAATCAGGGCCCAGTTCAAATTTTTGCTCCTCTGAAAAATACCAAAGACCTGTGCTTGAAGAGGCTTTTAAAAGAAGACGTCCTTTCGGCGCCCAGATCATTTTCTTCCCACAGACCGACGTCTCGTCACTCAGTAGTGGGTGATCACAGAAAGTACCGGCAGAGACGGTCTGAGCTGACAGTCAACTCTGCTTCTTGAACGCCACTGAGCGACACTAGTCATTTTAATGCGGGTGCTATTTGAGGAAGCCTTTATAGAGCAGGTGGGAGTGACTggtccctctttcattctccAGGCAGAAGAGCAGGTCCCTGAGGTTGACTCTGGTGATGCGCTGTCGCATAAACTGTCTGGAGCCTGCTCCACCGGAGCCTCCAGGCTGAGAGGGGCCTGACCCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66817 True 2268 lncRNA 0.38 2 15667249 15669544
TU66818 False 2264 lncRNA 0.38 2 15667249 15669544

Neighbor

gene id symbol gene type direction distance location
LOC120558693 cdh4,LOC100707506,LOC101477622 coding upstream 29826 15375411 ~ 15637423 (+)
kcnk15 LOC104919657,LOC103357353,LOC104951678,LOC100707244 coding upstream 552065 15088421 ~ 15115184 (+)
LOC120559274 NA coding upstream 590304 15071921 ~ 15076945 (+)
si:ch73-181d5.4 NA coding upstream 596836 15032707 ~ 15070413 (+)
trnak-cuu NA coding upstream 654282 15012895 ~ 15012967 (+)
lsm14b NA coding downstream 12713 15682257 ~ 15686191 (+)
LOC120559909 ss18l1,LOC102784650 coding downstream 17781 15687325 ~ 15696878 (+)
mtg2 mtg2 coding downstream 27735 15697279 ~ 15700376 (+)
spo11 spo11,LOC103368783 coding downstream 163639 15833183 ~ 15840777 (+)
LOC120558427 LOC104958737 coding downstream 172399 15841943 ~ 15847795 (+)
G50011 NA non-coding upstream 27948 15637483 ~ 15639301 (+)
G50014 NA non-coding upstream 244641 15422319 ~ 15422608 (+)
G50003 NA non-coding upstream 389603 15277446 ~ 15277646 (+)
G50002 NA non-coding upstream 390889 15276113 ~ 15276360 (+)
LOC120559279 NA non-coding upstream 426122 15207742 ~ 15241127 (+)
G50029 NA non-coding downstream 35552 15705096 ~ 15705468 (+)
G50077 NA non-coding downstream 279705 15949249 ~ 15951172 (+)
G50218 NA non-coding downstream 616013 16285557 ~ 16285759 (+)
G50280 NA non-coding downstream 756074 16425618 ~ 16425820 (+)
LOC120558722 NA non-coding downstream 874725 16544269 ~ 16545835 (+)
G49776 NA other upstream 1089677 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 1099793 14564867 ~ 14567456 (+)
uhrf1bp1 uhrf1bp1 other upstream 1439361 14205597 ~ 14227888 (+)
hmga1a hmga1,LOC103355299 other upstream 1546227 14113015 ~ 14121022 (+)
LOC120558697 LOC103355228,LOC101470284,LOC102288766,LOC101062828,LOC100700879,LOC102197182,LOC102790759 other upstream 1942259 13658732 ~ 13724990 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other downstream 102673 15772217 ~ 15798957 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other downstream 106673 15776217 ~ 15867369 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other downstream 216446 15885990 ~ 15969331 (+)
LOC120559121 NA other downstream 634768 16304312 ~ 16311017 (+)
LOC120559119 LOC104967193 other downstream 653277 16322821 ~ 16379645 (+)

Expression


Co-expression Network