LOC120559121


Basic Information

Item Value
gene id LOC120559121
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16304312 ~ 16311017 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU67076
CCCTAGGCGGCGCAGCGTGGTGATGTAACTGGACAGCAGAGACCGTCACGCCAGGGAGACCAGGAAGTTTTATCGGGAGGCTGTCGGTCGGAAAGAGCAAGTCCCATGTGACGTTTGTTTGTCATTATGACAGGTTTGTGAATCACGGACATTGACGATTACCATGAGCAGCTCCAGAGGGACGCCCATTTCCTGTGCTCAGACCAGAGGATGGAAACTGAACTGGTTGACAGACTGGTGCTGCAGCTGAACAGGATATACCCCCAGATACTCAGTGACAAGGAAGCCCACATGGTCACTACAGAGAACATTTGACATCATTCTAACAACACAAAACATCCTGTTTTGACAGTCATCATGCCCTTACACTTGAATCTGCCAAACTAAAAATGGAACTTGCAACAGAAGTATGCAGGTATACAGGTGTGTTTAGTGATTCAATTCAGCATGTGTCTCCCTGCAGTTCAGGAACCTGAGCGTGCCCACCAGGGTGCGGCTACCTGAGCTGTTGAAGCACCTGTATGGGAAGGGCGAGGAGGCGTGTTATGAATTCTACAGAGGACTTCACATCCACGCTGAGGACGTTTACGCCAGCCTGCCCACCAGAGTCATACAAAgagAGGTGGCTGATCCAAAATGGACTAACAATGTGGCGATCCACCCAGAGCGACGTCTGCTTAATGACAGAGGACCAATGTTCTTCCTGAGCTGTTTCAGTTTTGCTGCTGGTATTGCAATGCTCTACTATTACGGAGAAATTGAGACACTGAGAAGCACTGGTCTGTTTCTTCACTGCTCTGCAGCAAGATTTAGTGAAGGTGCTAAATATGTTTTCATTTCTTCTGCTGAGGTTGGAAAGCAGAAGAAATGAGACCGTTAAGATGCTGAAATGCTTAAGAAGTAACCTATGAGAAGAACAAGCTGTGAAAATTGCCACTTTGCTGTGCCAAACTCATACACGCTTTTGAGAGCTAAAAATGTCATGCATTTGTAAGCACtaatttagttgtttttttaatctgaagCTGACAATAACATGAGTTGCTGTGTCTTGAATTCCCACAGCTAACATCTATTtacatgaaaaaaatgtaatgagtGTGATCTGGATTTATTGTGTGTACAGAACTATTGATTCCAATCAGCTAAAATTAGTAACTGcactagcctgggaaaaccctgaacttctagcaaatttgagatttgctctgcaagccactctcagttacaactgagaagggtctggtgtcaaccaggctataaCTGCACACCCAAACAGGTGTTTTCAACtcagcatttgtcgcaagtcagccaacgtggttgtgttggtcactctggcacgaacagcacgcccaagctgatcccacaagtgttcaatggggttgaggtcaggactgctggttgaagaatgggatgccatcccacagcagtgtgtgaccaggctggtgaccagatTGGGGAGgtggtgccaggctgttgtggctgtgtatcgTTCTTCCACaagctactgaggctcctgtttgtgaaatg
>TU67077
CCCTAGGCGGCGCAGCGTGGTGATGTAACTGGACAGCAGAGACCGTCACGCCAGGGAGACCAGGAAGTTTTATCGGGAGGCTGTCGGTCGGAAAGAGCAAGTCCCATGTGACGTTTGTTTGTCATTATGACAGACATTGACGATTACCATGAGCAGCTCCAGAGGGACGCCCATTTCCTGTGCTCAGACCAGAGGATGGAAACTGAACTGGTTGACAGACTGGTGCTGCAGCTGAACAGGATATACCCCCAGATACTCAGTGACAAGGAAGCCCACATGGTCACTACAGAGAACATTTGACATCATTCTAACAACACAAAACATCCTGTTTTGACAGTCATCATGCCCTTACACTTGAATCTGCCAAACTAAAAATGGAACTTGCAACAGAAGTATGCAGGTATACAGGTGTGTTTAGTGATTCAATTCAGCATGTGTCTCCCTGCAGTTCAGGAACCTGAGCGTGCCCACCAGGGTGCGGCTACCTGAGCTGTTGAAGCACCTGTATGGGAAGGGCGAGGAGGCGTGTTATGAATTCTACAGAGGACTTCACATCCACGCTGAGGACGTTTACGCCAGCCTGCCCACCAGAGTCATACAAAgagAGGTGGCTGATCCAAAATGGACTAACAATGTGGCGATCCACCCAGAGCGACGTCTGCTTAATGACAGAGGACCAATGTTCTTCCTGAGCTGTTTCAGTTTTGCTGCTGGTATTGCAATGCTCTACTATTACGGAGAAATTGAGACACTGAGAAGCACTGGTCTGTTTCTTCACTGCTCTGCAGCAAGATTTAGTGAAGGTGCTAAATATGTTTTCATTTCTTCTGCTGAGGTTGGAAAGCAGAAGAAATGAGACCGTTAAGATGCTGAAATGCTTAAGAAGTAACCTATGAGAAGAACAAGCTGTGAAAATTGCCACTTTGCTGTGCCAAACTCATACACGCTTTTGAGAGCTAAAAATGTCATGCATTTGTAAGCACtaatttagttgtttttttaatctgaagCTGACAATAACATGAGTTGCTGTGTCTTGAATTCCCACAGCTAACATCTATTtacatgaaaaaaatgtaatgagtGTGATCTGGATTTATTGTGTGTACAGAACTATTGATTCCAATCAGCTAAAATTAGTAACTGcactagcctgggaaaaccctgaacttctagcaaatttgagatttgctctgcaagccactctcagttacaactgagaagggtctggtgtcaaccaggctataaCTGCACACCCAAACAGGTGTTTTCAACtcagcatttgtcgcaagtcagccaacgtggttgtgttggtcactctggcacgaacagcacgcccaagctgatcccacaagtgttcaatggggttgaggtcaggactgctggttgaagaatgggatgccatcccacagcagtgtgtgaccaggctggtgaccagatTGGGGAGgtggtgccaggctgttgtggctgtgtatcgTTCTTCCACaagctactgaggctcctgtttgtgaaatg
>TU67086
CCCTAGGCGGCGCAGCGTGGTGATGTAACTGGACAGCAGAGACCGTCACGCCAGGGAGACCAGGAAGTTTTATCGGGAGGCTGTCGGTCGGAAAGAGCAAGTCCCATGTGACGTTTGTTTGTCATTATGACAGACATTGACGATTACCATGAGCAGCTCCAGAGGGACGCCCATTTCCTGTGCTCAGACCAGAGGATGGAAACTGAACTGGTTGACAGACTGGTGCTGCAGCTGAACAGGATATACCCCCAGATACTCAGTGACAAGGAAGCCCACATGGTCACTACAGAGAACATTTGACATCATTCTAACAACACAAAACATCCTGTTTTGACAGTCATCATGCCCTTACACTTGAATCTGCCAAACTAAAAATGGAACTTGCAACAGAAGTATGCAGGTATACAGGTGTGTTTAGTGATTCAATTCAGCATGTGTCTCCCTGCAGTTCAGGAACCTGAGCGTGCCCACCAGGGTGCGGCTACCTGAGCTGTTGAAGCACCTGTATGGGAAGGGCGAGGAGGCGTGTTATGAATTCTACAGAGGACTTCACATCCACGCTGAGGACGTTTACGCCAGCCTGCCCACCAGAGTCATACAAAgagAGGTGGCTGATCCAAAATGGACTAACAATGTGGCGATCCACCCAGAGCGACGTCTGCTTAATGACAGAGGACCAATGTTCTTCCTGAGCTGTTTCAGTTTTGCTGCTGGTATTGCAATGCTCTACTATTACGGAGGTGAGTCATACAGAAAGATGGAGAAGTGTTCAGACTTATTTGTCCTTGGACATTTGAAATTACTTTGAATATCAAGAATTGTACAAAAATCACCCAAAGCCCATCTAACTCTTTTATCTCATATTCTAAACCACTCCCCATATATCTTAAAACTCTTTGTTGCCACTCTCTCTGCCCACAGAAATTGAGACACTGAGAAGCACTGGTCTGTTTCTTCACTGCTCTGCAGCAAGATTTAGTGAAGGTGCTAAATATGTTTTCATTTCTTCTGCTGAGGTTGGAAAGCAGAAGAAATGAGACCGTTAAGATGCTGAAATGCTTAAGAAGTAACCTATGAGAAGAACAAGCTGTGAAAATTGCCACTTTGCTGTGCCAAACTCATACACGCTTTTGAGAGCTAAAAATGTCATGCATTTGTAAGCACtaatttagttgtttttttaatctgaagCTGACAATAACATGAGTTGCTGTGTCTTGAATTCCCACAGCTAACATCTATTtacatgaaaaaaatgtaatgagtGTGATCTGGATTTATTGTGTGTACAGAACTATTGATTCCAATCAGCTAAAATTAGTAACTGcactagcctgggaaaaccctgaacttctagcaaatttgagatttgctctgcaagccactctcagttacaactgagaagggtctggtgtcaaccaggctataaCTGCACACCCAAACAGGTGTTTTCAACtcagcatttgtcgcaagtcagccaacgtggttgtgttggtcactctggcacgaacagcacgcccaagctgatcccacaagtgttcaatggggttgaggtcaggactgctggttgaagaatgggatgccatcccacagcagtgtgtgaccaggctggtgaccagatTGGGGAGgtggtgccaggctgttgtggctgtgtatcgTTCTTCCACaagctactgaggctcctgtttgtgaaatg
>XM_039800590.1
TGTCACCTCTGTGTTGCTGTTTGCAACAGAAAGCTTAGATCCTGGTAATCTGCCTGTCAGCTCAGTCAGTCCACTGCCGCTGTCTGCGGACTGATAATCACCCTGAGGTCAGTCATGCGGCCCTAGGCGGCGCAGCGTGGTGATGTAACTGGACAGCAGAGACCGTCACGCCAGGGAGACCAGGAAGTTTTATCGGGAGGCTGTCGGTCGGAAAGAGCAAGTCCCATGTGACGTTTGTTTGTCATTATGACAGACATTGACGATTACCATGAGCAGCTCCAGAGGGACGCCCATTTCCTGTGCTCAGACCAGAGGATGGAAACTGAACTGGTTGACAGACTGGTGCTGCAGCTGAACAGGATATACCCCCAGATACTCAGTGACAAGGAAGCCCACATGTTCAGGAACCTGAGCGTGCCCACCAGGGTGCGGCTACCTGAGCTGTTGAAGCACCTGTATGGGAAGGGCGAGGAGGCGTGTTATGAATTCTACAGAGGACTTCACATCCACGCTGAGGACGTTTACGCCAGCCTGCCCACCAGAGTCATACAAAgagAGGTGGCTGATCCAAAATGGACTAACAATGTGGCGATCCACCCAGAGCGACGTCTGCTTAATGACAGAGGACCAATGTTCTTCCTGAGCTGTTTCAGTTTTGCTGCTGGTATTGCAATGCTCTACTATTACGGAGAAATTGAGACACTGAGAAGCACTGGTCTGTTTCTTCACTGCTCTGCAGCAAGATTTAGTGAAGGTGCTAAATATGTTTTCATTTCTTCTGCTGAGGTTGGAAAGCAGAAGAAATGAGACCGTTAAGATGCTGAAATGCTTAAGAAGTAACCTATGAGAAGAACAAGCTGTGAAAATTGCCACTTTGCTGTGCCAAACTCATACACGCTTTTGAGAGCTAAAAATGTCATGCATTTGTAAGCACtaatttagttgtttttttaatctgaagCTGACAATAACATGAGTTGCTGTGTCTTGAATTCCCACAGCTAACATCTATTtacatgaaaaaaatgtaatgagtGTGATCTGGATTTATTGTGTGTACAGAACTATTGATTCCAATCAGCTAAAATTAGTAACTGcactagcctgggaaaaccctgaacttctagcaaatttgagatttgctctgcaagccactctcagttacaactgagaagggtctggtgtcaaccaggctataaCTGCACACCCAAACAGGTGTTTTCAACtcagcatttgtcgcaagtcagccaacgtggttgtgttggtcactctggcacgaacagcacgcccaagctgatcccacaagtgttcaatggggttgaggtcaggactgctggttgaagaa
>XM_039800591.1
CACCTCTGTGTTGCTGTTTGCAACAGAAAGCTTAGATCCTGGTAATCTGCCTGTCAGCTCAGTCAGTCCACTGCCGCTGTCTGCGGACTGATAATCACCCTGAGGTCAGTCATGCGGCCCTAGGCGGCGCAGCGTGGTGATGTAACTGGACAGCAGAGACCGTCACGCCAGGGAGACCAGGAAGTTTTATCGGGAGGCTGTCGGTCGGAAAGAGCAAGTCCCATGTGACGTTTGTTTGTCATTATGACAGGTTTGTGAATCACGGACATTGACGATTACCATGAGCAGCTCCAGAGGGACGCCCATTTCCTGTGCTCAGACCAGAGGATGGAAACTGAACTGGTTGACAGACTGGTGCTGCAGCTGAACAGGATATACCCCCAGATACTCAGTGACAAGGAAGCCCACATGTTCAGGAACCTGAGCGTGCCCACCAGGGTGCGGCTACCTGAGCTGTTGAAGCACCTGTATGGGAAGGGCGAGGAGGCGTGTTATGAATTCTACAGAGGACTTCACATCCACGCTGAGGACGTTTACGCCAGCCTGCCCACCAGAGTCATACAAAgagAGGTGGCTGATCCAAAATGGACTAACAATGTGGCGATCCACCCAGAGCGACGTCTGCTTAATGACAGAGGACCAATGTTCTTCCTGAGCTGTTTCAGTTTTGCTGCTGGTATTGCAATGCTCTACTATTACGGAGAAATTGAGACACTGAGAAGCACTGGTCTGTTTCTTCACTGCTCTGCAGCAAGATTTAGTGAAGGTGCTAAATATGTTTTCATTTCTTCTGCTGAGGTTGGAAAGCAGAAGAAATGAGACCGTTAAGATGCTGAAATGCTTAAGAAGTAACCTATGAGAAGAACAAGCTGTGAAAATTGCCACTTTGCTGTGCCAAACTCATACACGCTTTTGAGAGCTAAAAATGTCATGCATTTGTAAGCACtaatttagttgtttttttaatctgaagCTGACAATAACATGAGTTGCTGTGTCTTGAATTCCCACAGCTAACATCTATTtacatgaaaaaaatgtaatgagtGTGATCTGGATTTATTGTGTGTACAGAACTATTGATTCCAATCAGCTAAAATTAGTAACTGcactagcctgggaaaaccctgaacttctagcaaatttgagatttgctctgcaagccactctcagttacaactgagaagggtctggtgtcaaccaggctataaCTGCACACCCAAACAGGTGTTTTCAACtcagcatttgtcgcaagtcagccaacgtggttgtgttggtcactctggcacgaacagcacgcccaagctgatcccacaagtgttcaatggggttgaggtcaggactgctggttgaagaa
>XM_039800592.1
GACAGCAGAGCAGTTTGTCAGGAGTGAACCCATCAACCACAGATGAGTCCAACACGAGGAATAATAACCCTGCCAAAGACTTTTCCATTCGTATTATATCAGTGTGAGGACACATTACACTGGAGACATTGACGATTACCATGAGCAGCTCCAGAGGGACGCCCATTTCCTGTGCTCAGACCAGAGGATGGAAACTGAACTGGTTGACAGACTGGTGCTGCAGCTGAACAGGATATACCCCCAGATACTCAGTGACAAGGAAGCCCACATGTTCAGGAACCTGAGCGTGCCCACCAGGGTGCGGCTACCTGAGCTGTTGAAGCACCTGTATGGGAAGGGCGAGGAGGCGTGTTATGAATTCTACAGAGGACTTCACATCCACGCTGAGGACGTTTACGCCAGCCTGCCCACCAGAGTCATACAAAgagAGGTGGCTGATCCAAAATGGACTAACAATGTGGCGATCCACCCAGAGCGACGTCTGCTTAATGACAGAGGACCAATGTTCTTCCTGAGCTGTTTCAGTTTTGCTGCTGGTATTGCAATGCTCTACTATTACGGAGAAATTGAGACACTGAGAAGCACTGGTCTGTTTCTTCACTGCTCTGCAGCAAGATTTAGTGAAGGTGCTAAATATGTTTTCATTTCTTCTGCTGAGGTTGGAAAGCAGAAGAAATGAGACCGTTAAGATGCTGAAATGCTTAAGAAGTAACCTATGAGAAGAACAAGCTGTGAAAATTGCCACTTTGCTGTGCCAAACTCATACACGCTTTTGAGAGCTAAAAATGTCATGCATTTGTAAGCACtaatttagttgtttttttaatctgaagCTGACAATAACATGAGTTGCTGTGTCTTGAATTCCCACAGCTAACATCTATTtacatgaaaaaaatgtaatgagtGTGATCTGGATTTATTGTGTGTACAGAACTATTGATTCCAATCAGCTAAAATTAGTAACTGcactagcctgggaaaaccctgaacttctagcaaatttgagatttgctctgcaagccactctcagttacaactgagaagggtctggtgtcaaccaggctataaCTGCACACCCAAACAGGTGTTTTCAACtcagcatttgtcgcaagtcagccaacgtggttgtgttggtcactctggcacgaacagcacgcccaagctgatcccacaagtgttcaatggggttgaggtcaggactgctggttgaagaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67076 False 1530 lncRNA 0.47 5 16305349 16311017
TU67077 False 1515 lncRNA 0.47 5 16305349 16311017
TU67086 True 1696 lncRNA 0.45 4 16305349 16311017
XM_039800590.1 False 1345 mRNA 0.47 6 16305229 16310896
XM_039800591.1 False 1357 mRNA 0.47 6 16305232 16310896
XM_039800592.1 False 1217 mRNA 0.45 6 16304312 16310896

Neighbor

gene id symbol gene type direction distance location
fgd fgd3,LOC104966710 coding upstream 20513 16225552 ~ 16283799 (+)
LOC120558327 LOC103361995,LOC104966709 coding upstream 84054 16176577 ~ 16220258 (+)
fbxw12 fbxw12 coding upstream 130711 16162697 ~ 16173601 (+)
LOC120559808 NA coding upstream 167499 16135340 ~ 16136813 (+)
LOC120559610 fbln2 coding upstream 177236 16103359 ~ 16127076 (+)
wu:fl23c11 NA coding downstream 98264 16409281 ~ 16418412 (+)
LOC120558716 creld1,LOC102797660,LOC103361984,LOC100691430 coding downstream 107818 16418835 ~ 16424181 (+)
ift122 ift122,LOC102796889 coding downstream 118562 16429579 ~ 16450630 (+)
LOC120558717 rho coding downstream 140751 16451768 ~ 16459991 (+)
trh trh coding downstream 300200 16611217 ~ 16613788 (+)
G50218 NA non-coding upstream 18553 16285557 ~ 16285759 (+)
G50077 NA non-coding upstream 353140 15949249 ~ 15951172 (+)
G50029 NA non-coding upstream 598844 15705096 ~ 15705468 (+)
G50017 NA non-coding upstream 634768 15667249 ~ 15669544 (+)
G50011 NA non-coding upstream 665011 15637483 ~ 15639301 (+)
G50280 NA non-coding downstream 114601 16425618 ~ 16425820 (+)
LOC120558722 NA non-coding downstream 233252 16544269 ~ 16545835 (+)
G50318 NA non-coding downstream 255984 16567001 ~ 16569382 (+)
G50320 NA non-coding downstream 269042 16580059 ~ 16580993 (+)
G50326 NA non-coding downstream 294948 16605965 ~ 16626218 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other upstream 334981 15885990 ~ 15969331 (+)
G50045 tnnc1,LOC107391089,LOC103147776,LOC100708228,LOC108232086,LOC105932306,LOC102236084 other upstream 436943 15776217 ~ 15867369 (+)
zmp:0000000926 LOC104958731,LOC103370836,LOC104919619 other upstream 505355 15772217 ~ 15798957 (+)
G49776 NA other upstream 1726740 14574542 ~ 14577572 (+)
G49773 LOC103358639 other upstream 1736856 14564867 ~ 14567456 (+)
LOC120559119 LOC104967193 other downstream 11804 16322821 ~ 16379645 (+)
brpf1 brpf1 other downstream 69027 16380044 ~ 16396208 (+)
LOC120559923 NA other downstream 86652 16397669 ~ 16408461 (+)
eif2d eif2d other downstream 666880 16977897 ~ 16994701 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other downstream 874894 17185911 ~ 17197173 (+)

Expression


Co-expression Network