G50280


Basic Information

Item Value
gene id G50280
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 16425618 ~ 16425820 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU67180
CTCATTTTGTAGTTCAGGTTGTTTCTTCTGTTCGCCCACCAGAGTAGTCTTTTTGGAATCAAGCTTAAGTGTCAATGCCTGCACAAATGAATTATCTCTTTAAAGTAGCATTTCTGATTTCTAGTAAATAataacacaactccaaatgtacagtaaatatagcAAATTACTGTACTGGCACTAGTTAGAGATTAAACTGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67180 True 203 lncRNA 0.34 1 16425618 16425820

Neighbor

gene id symbol gene type direction distance location
LOC120558716 creld1,LOC102797660,LOC103361984,LOC100691430 coding upstream 1437 16418835 ~ 16424181 (+)
wu:fl23c11 NA coding upstream 7206 16409281 ~ 16418412 (+)
LOC120559120 NA coding upstream 120651 16297931 ~ 16304967 (+)
fgd fgd3,LOC104966710 coding upstream 141819 16225552 ~ 16283799 (+)
LOC120558327 LOC103361995,LOC104966709 coding upstream 205360 16176577 ~ 16220258 (+)
ift122 ift122,LOC102796889 coding downstream 3759 16429579 ~ 16450630 (+)
LOC120558717 rho coding downstream 25948 16451768 ~ 16459991 (+)
trh trh coding downstream 185397 16611217 ~ 16613788 (+)
LOC120559103 rbsn coding downstream 192643 16618463 ~ 16625418 (+)
b3galt4 b3galt4,LOC104957801,LOC102791999 coding downstream 220363 16646183 ~ 16649147 (+)
G50218 NA non-coding upstream 139859 16285557 ~ 16285759 (+)
G50077 NA non-coding upstream 474446 15949249 ~ 15951172 (+)
G50029 NA non-coding upstream 720150 15705096 ~ 15705468 (+)
G50017 NA non-coding upstream 756074 15667249 ~ 15669544 (+)
G50011 NA non-coding upstream 786317 15637483 ~ 15639301 (+)
LOC120558722 NA non-coding downstream 118449 16544269 ~ 16545835 (+)
G50318 NA non-coding downstream 141181 16567001 ~ 16569382 (+)
G50320 NA non-coding downstream 154239 16580059 ~ 16580993 (+)
G50326 NA non-coding downstream 180145 16605965 ~ 16626218 (+)
LOC120559512 NA non-coding downstream 254761 16680581 ~ 16683534 (+)
LOC120559923 NA other upstream 17157 16397669 ~ 16408461 (+)
brpf1 brpf1 other upstream 29410 16380044 ~ 16396208 (+)
LOC120559119 LOC104967193 other upstream 45973 16322821 ~ 16379645 (+)
LOC120559121 NA other upstream 114601 16304312 ~ 16311017 (+)
slc6a1a iqsec1,LOC104940213,LOC107088165 other upstream 456287 15885990 ~ 15969331 (+)
eif2d eif2d other downstream 552077 16977897 ~ 16994701 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other downstream 760091 17185911 ~ 17197173 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other downstream 1315551 17741371 ~ 17786398 (+)
opn7b LOC103364157,LOC103467481 other downstream 1830072 18255892 ~ 18300333 (+)
G50983 LOC103366028 other downstream 2256323 18682143 ~ 18686302 (+)

Expression


Co-expression Network