G50700


Basic Information

Item Value
gene id G50700
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 17668838 ~ 17670631 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU67785
CACGCGGTGAATGCCAAGAGAGGAATCTCCACAGCATCATGCTTCACATGTTTTATCTCTTCATTGTCTCATCAGGCCGCAGGATTTAGTTTACTACTTTGACCCTTAATGTTCCAGAAACAGGACCTGGCTACCAAGCATAGCAGCAGGATAAAGCTGACTTCTGTACTGTCACTCAACTGcgcgtgagtgagtgtgtgtgtgtgtgtgtgtgtgtgcgcccgcGCAAGCATGTATGCGTGCCTATGTGTCTGTTTATTGCTTTGACTGGATGGGCGCAATGCGTACTTTAATATGCTATTACAGAATGAAATGAGGTTACCGCCAGTTAACCATTACATCACGTCTTTAGTCAGAAATAGCCtagttttaaatgtttagtCTGCTTATCCATCAAATGTTTAACGCCTCGCGCAAAATACGACGCAGGTTTACGAAAACAATTGGACTTTCGCCAAGTGGGGCCAATGGCCTACCTCTGGGTTCTACTAACTTATCTTTCGGGAGTCATTGACATTCAtggtattcttttttttttttgtaaattaagGAGCTGGCGAGAGGCTTGCTTCATTTTTAAGTAGCCTAcgcagtttttatttatttggagtaaaaaaaatctgtttattGTCAGGCGGTCAAGGGTGGGAGAGTTGaccttaatataaaatataaaaaataatcaatatctagatttaaaatgtagacctAGGTACGACTCAATACATTGGCTAATGCTACTGATGCAAAGCCTGCCTACACATTAAACAGGGAAACATCTTAGTGCATTAACGCTAAATCCTTATCTTTAGGAGTCTGTGCGGCAGTCTCTATAGGCTATTGCAGTCCTATTGTAACCGtcagaaatattttacaaaacGTCACAGAGGCCAACACTGTAGGCTACAGTCTCAGCTataataacttattttttataaacaaaAGTAGGTCAACAGCTCCAGTCCACCACACCTTCACTGTGCGGCTCAAAGCTCAGGCCTTCAGCAGAGGCTGAAGAGCTTTGAAGGGACACAGACTGAAGATGGCTGCAGTGTTTAGTCGGATGGAGTCAACATATAGAAACCTAAGTGATTCAATGCCACCTACAGGCGTCCTTCTGACAATGCATGTTTGAAGATGTAGCCCAGTTGGAATTAATACTAcactaaattaaataaactaaaagttaataaataaatagttgcACAGGCTTTCTAGTATAGTCATCACTGAAGTAGTATATTGTGTCAGATGTCATCCCCCATGGAGTATTCTTGCAGGAAAGAtacattcaatttaaaaggGATATAGTTTTAATGATAAACTCAAGGTCTTCAACACATATTTTTGAAGATAAATTACTTTTAGTAAGAACCAATTAATGAACCAAATTGGAtcaaattaaacattaataggAGAAGTTGGCAAAAGTTGTATATTCTTTCttttatgtagcctacagtacATCATAGGCTTTCATGTAACATTACATTTGTGATCCTATATTTGAATTGAACCTAAATATATGTCCCTTTTTAATCGAGAATCTGAGCATTGAgctaaaaacaaatataattgtAGGGTCGTTATTAGTAATATATTTATGCCACACATGGTTTGCTCCAGATTGATACGAGTCTATAGCATCGAGCCCGAATGTGATATTGTTTGCCTATTTTTTGTCTCAAGTTTCATGCATACTTTGTAATGTGACAACAAATAAAGCCTGTTCAAACTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67785 True 1740 lncRNA 0.38 2 17668838 17670631

Neighbor

gene id symbol gene type direction distance location
slc17a9b slc17a9,LOC102799335 coding upstream 81258 17576722 ~ 17587580 (+)
LOC120558532 gid8 coding upstream 93695 17571779 ~ 17575143 (+)
LOC120559200 LOC103354450 coding upstream 150424 17511672 ~ 17518414 (+)
LOC120559455 LOC103354448,LOC104961977 coding upstream 274115 17375003 ~ 17394723 (+)
LOC120559551 LOC100699720,LOC103354465 coding upstream 345808 17272953 ~ 17323030 (+)
birc7 birc7 coding downstream 15516 17686147 ~ 17689867 (+)
si:rp71-79p20.2 slc2a4rg,LOC104941506 coding downstream 116713 17787344 ~ 17831215 (+)
prpf6 prpf6 coding downstream 369296 18039927 ~ 18057366 (+)
aar2 aar2,LOC103372053 coding downstream 390558 18061189 ~ 18064974 (+)
LOC120559899 emilin3 coding downstream 470193 18140824 ~ 18156119 (+)
G50518 NA non-coding upstream 505173 17163179 ~ 17163665 (+)
G50509 NA non-coding upstream 516925 17151182 ~ 17151913 (+)
G50505 LOC103354436 non-coding upstream 533348 17134688 ~ 17135490 (+)
G50493 LOC103467546,LOC102230394,LOC105927130,LOC106947997,LOC103145058,LOC101167287,LOC104935375,LOC108231917 non-coding upstream 563874 17098622 ~ 17104964 (+)
G50410 LOC103368435 non-coding upstream 838958 16826880 ~ 16829880 (+)
G50725 NA non-coding downstream 79654 17750285 ~ 17776236 (+)
G50727 zbtb46,LOC104941523,LOC102795869 non-coding downstream 105771 17776402 ~ 17835766 (+)
G50752 NA non-coding downstream 273081 17943712 ~ 17944815 (+)
G50753 NA non-coding downstream 286567 17957198 ~ 17957644 (+)
G50817 NA non-coding downstream 462811 18133442 ~ 18133815 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other upstream 471665 17185911 ~ 17197173 (+)
eif2d eif2d other upstream 674137 16977897 ~ 16994701 (+)
LOC120559923 NA other upstream 1260377 16397669 ~ 16408461 (+)
brpf1 brpf1 other upstream 1272630 16380044 ~ 16396208 (+)
LOC120559119 LOC104967193 other upstream 1289193 16322821 ~ 16379645 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other downstream 70740 17741371 ~ 17786398 (+)
opn7b LOC103364157,LOC103467481 other downstream 585261 18255892 ~ 18300333 (+)
G50983 LOC103366028 other downstream 1011512 18682143 ~ 18686302 (+)
LOC120558947 lrtm1,LOC102799284 other downstream 1785846 19456477 ~ 19463712 (+)
LOC120558920 LOC104941542 other downstream 2096995 19767626 ~ 19768564 (+)

Expression


Co-expression Network