G50875


Basic Information

Item Value
gene id G50875
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 18303982 ~ 18304184 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68010
acacacacacacacacacacacacacatattctttattctaaaaatgatacctttggtttacatatgtttatacttttttttttcttgtttcatgctactgtatacaacactgggctactcttacagacgtaatgttttgcccaatacatattttctgttttactgtaacattacattgttttttacagtgcacttttcaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68010 True 203 lncRNA 0.32 1 18303982 18304184

Neighbor

gene id symbol gene type direction distance location
slc9a8 slc9a8 coding upstream 91905 18191887 ~ 18212077 (+)
LOC120559899 emilin3 coding upstream 147863 18140824 ~ 18156119 (+)
aar2 aar2,LOC103372053 coding upstream 239008 18061189 ~ 18064974 (+)
prpf6 prpf6 coding upstream 246616 18039927 ~ 18057366 (+)
si:rp71-79p20.2 slc2a4rg,LOC104941506 coding upstream 472767 17787344 ~ 17831215 (+)
rnf114 rnf114,LOC103364155,LOC104964933,LOC104925098 coding downstream 37526 18341710 ~ 18349313 (+)
mafba mafb,LOC107087611 coding downstream 84433 18388617 ~ 18392479 (+)
zhx3 LOC103366026 coding downstream 317653 18621837 ~ 18634328 (+)
trnaa-ugc_5 NA coding downstream 425296 18729480 ~ 18729551 (+)
snai1b LOC104927488,LOC104965648,LOC103366033 coding downstream 433748 18737932 ~ 18740322 (+)
G50874 NA non-coding upstream 1314 18302282 ~ 18302668 (+)
G50860 NA non-coding upstream 36095 18267465 ~ 18267887 (+)
G50846 NA non-coding upstream 66172 18237518 ~ 18237810 (+)
G50817 NA non-coding upstream 170167 18133442 ~ 18133815 (+)
G50753 NA non-coding upstream 346338 17957198 ~ 17957644 (+)
G50883 NA non-coding downstream 9150 18313334 ~ 18313603 (+)
G50887 NA non-coding downstream 19190 18323374 ~ 18323642 (+)
G50894 NA non-coding downstream 27323 18331507 ~ 18331876 (+)
G50895 spata2 non-coding downstream 28400 18332584 ~ 18337729 (+)
G50902 NA non-coding downstream 63837 18368021 ~ 18368329 (+)
opn7b LOC103364157,LOC103467481 other upstream 3649 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 517584 17741371 ~ 17786398 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other upstream 1106809 17185911 ~ 17197173 (+)
eif2d eif2d other upstream 1309281 16977897 ~ 16994701 (+)
LOC120559923 NA other upstream 1895521 16397669 ~ 16408461 (+)
G50983 LOC103366028 other downstream 377959 18682143 ~ 18686302 (+)
LOC120558947 lrtm1,LOC102799284 other downstream 1152293 19456477 ~ 19463712 (+)
LOC120558920 LOC104941542 other downstream 1463442 19767626 ~ 19768564 (+)
zgc:194242 NA other downstream 1692293 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 1759808 20063992 ~ 20065735 (+)

Expression


Co-expression Network