G50983 (LOC103366028)


Basic Information

Item Value
gene id G50983
gene name LOC103366028
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 18682143 ~ 18686302 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68128
GCGCCATTTGGATCCATCTGTAGATCTTTCCTCCTCCCACCATTTCcacttctcctcttcttctttcttggCTTTCTTTCCTTCTGTTCCCTTCTTgtcttttgtcttctttttgggCTTGATGTCctcatcctcctcatcatctTCATACTCATGTTTCCTCTTCTTGGCCTTTTTGTCATGCTCTGTCTTGACTTTTTTGGGCTTGTAtacaaatTCTTCATCATCATATTCCCGTTTGGAGGTCTTGTTGTGTTGGGGAGAAGGGTAGAAGCCATTGTCTTCTTCAGGCTCGCTCTTAATGGCAGAAGGGCTTGTATCTCTTACATAtccattttctttctcttttttaggCTTGTCTACATGGGATGACCTGATcttctcttctctcctcttctctttgtccttgtctttctctttgtgtttttcCCTGTGCTTGTCTGAGCTGCCGTCGCTGTGCTTCAgcttctctttgtctctgtgtttcttctCAGAGTGGTCCTTATGTTCGCTGTTGCTGTGCttgaatttctctctctctttgtctttcttgtGGTCTTTGTGTCTGTATTCCTTGTCTTTGTGCTTGTCTTTATGTTTGTGGGTGTCGCCTCCTTTAGATCCAGAATTGACCTGAGAGTTTCCATGTCCATGCTCTCCGCTCATGGccaag
>TU68129
GCGCCATTTGGATCCATCTGTAGATCTTTCCTCCTCCCACCATTTCcacttctcctcttcttctttcttggCTTTCTTTCCTTCTGTTCCCTTCTTgtcttttgtcttctttttgggCTTGATGTCctcatcctcctcatcatctTCATACTCATGTTTCCTCTTCTTGGCCTTTTTGTCATGCTCTGTCTTGACTTTTTTGGGCTTGTAtacaaatTCTTCATCATCATATTCCCGTTTGGAGGTCTTGTTGTGTTGGGGAGAAGGGTAGAAGCCATTGTCTTCTTCAGGCTCGCTCTTAATGGCAGAAGGGCTTGTATCTCTTACATAtccattttctttctcttttttaggCTTGTCTACATGGGATGACCTGATcttctcttctctcctcttctctttgtccttgtctttctctttgtgtttttcCCTGTGCTTGTCTGAGCTGCCGTCGCTGTGCTTCAgcttctctttgtctctgtgtttcttctCAGAGTGGTCCTTATGTTCGCTGTTGCTGTGCttgaatttctctctctctttgtctttcttgtGGTCTTTGTGTCTGTATTCCTTGTCTTTGTGCTTGTCTTTATGTTTGTGGGTGTCTAGGATACAAAGGAGAGATCAAC

Function

NR:

description
PREDICTED: DNA topoisomerase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68128 True 673 TUCP 0.44 9 18682143 18686302
TU68129 False 632 lncRNA 0.43 7 18682143 18684478

Neighbor

gene id symbol gene type direction distance location
zhx3 LOC103366026 coding upstream 47815 18621837 ~ 18634328 (+)
mafba mafb,LOC107087611 coding upstream 289664 18388617 ~ 18392479 (+)
rnf114 rnf114,LOC103364155,LOC104964933,LOC104925098 coding upstream 332830 18341710 ~ 18349313 (+)
slc9a8 slc9a8 coding upstream 470066 18191887 ~ 18212077 (+)
LOC120559899 emilin3 coding upstream 526024 18140824 ~ 18156119 (+)
trnaa-ugc_5 NA coding downstream 43178 18729480 ~ 18729551 (+)
snai1b LOC104927488,LOC104965648,LOC103366033 coding downstream 51630 18737932 ~ 18740322 (+)
LOC120559184 NA coding downstream 72634 18758936 ~ 18775522 (+)
si:ch211-117c9.2 LOC103370868 coding downstream 155883 18842185 ~ 18855337 (+)
LOC120558626 LOC108235173,LOC104963598,LOC102083184 coding downstream 197094 18883396 ~ 18885589 (+)
G50964 plcg1 non-coding upstream 41963 18636601 ~ 18640180 (+)
G50962 NA non-coding upstream 46911 18634466 ~ 18635232 (+)
G50944 NA non-coding upstream 177116 18504467 ~ 18505027 (+)
LOC120559505 NA non-coding upstream 266511 18395768 ~ 18415632 (+)
G50902 NA non-coding upstream 313814 18368021 ~ 18368329 (+)
G50994 ncoa6,LOC105926085 non-coding downstream 484 18686786 ~ 18688293 (+)
G51017 NA non-coding downstream 71742 18758044 ~ 18758397 (+)
LOC120559607 NA non-coding downstream 148978 18835280 ~ 18837431 (+)
G51028 NA non-coding downstream 169065 18855367 ~ 18856526 (+)
G51155 NA non-coding downstream 753385 19439687 ~ 19441326 (+)
opn7b LOC103364157,LOC103467481 other upstream 381810 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 895745 17741371 ~ 17786398 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other upstream 1484970 17185911 ~ 17197173 (+)
eif2d eif2d other upstream 1687442 16977897 ~ 16994701 (+)
LOC120559923 NA other upstream 2273682 16397669 ~ 16408461 (+)
LOC120558947 lrtm1,LOC102799284 other downstream 770175 19456477 ~ 19463712 (+)
LOC120558920 LOC104941542 other downstream 1081324 19767626 ~ 19768564 (+)
zgc:194242 NA other downstream 1310175 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 1377690 20063992 ~ 20065735 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 1759669 20445971 ~ 20532569 (+)

Expression


Co-expression Network