G51182


Basic Information

Item Value
gene id G51182
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19698081 ~ 19758691 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68390
GGGGAGTTTTTACATGTTTATTCACTATCACACTAAGTGCTCCCATTTCAAGATCCATCTCATTGCCTTGCTCTTATAATGTAATGTCATTTGGagttaaagtaaaaagaagACAGTTTATGATCTACAAGGTGTGCACCAAAACAGTCGGCCTCCCCCAccccaaaagaaaaaataaaatagaaatgaacaaaacacatgaaatataaagagaataaagagaaaaCTGATGTCATGTGCAAGAGCCCCTCCGAAGCCAGAGTGCTAGTTGAGGTGGGTGTAGTGGTGCCTCAAACCGGCAAGGGTTCATATTATGCCAGCTGAGATACTCAGATTACTTTCCAGCCAGGAGGGGCTATTGACTCTGGTTTAGCGGTGTCCTCAGGTGCTCCTACAGTTTCAAATGTGGGGTCTCGGGTAGAATTAAGGGCAAGGATACGGCCTGGTGGCAAAATGGATTTTCAATACATGTCACCATTTCTGGGATTCTTGGCTGAAATTTAATGAGGTacatctttataaaaaaaaaaagtcaggggGTCAGGTCTATGAGACAGGGGTTGGAAGAGGGAAGAGAGCAAGTAGAGTGGAGGGGAGAGAGTTGGCTGCATTAAAAAGATCCCTCCTTAAGTGCTGAAGGCTAGTAAAGAGTTTGAGGATGTTTTAGTGGGACACTGGCTGGGCTTTGGAGTACCAAGAGAACACTAATGCTTAGAATTAAACCGAGCGGAAAGGTTCTGCTACTGAGAAACATCAAGAGGTCCAGAATACATGCTCCCTTCCTTCAATGACCCCCCTGTTCCCACAGCCGACCAACAACTGATACCTAACACACATACAATTAACCTTAAATCAGCTTACTGGGGCTATGTACATTCAGGCACAGGTTTAAACAAACCACAGGCctaaaaaaaactgattgaTCCAATAGAGCTGACCTGGATCAACCCACCCATCAATCCCCAATTCCCTCCTCAAACACCCACACCCCCTGTCTTCCCACCCTCCTGTGGATAGGATCATCGTGGAGCTCAGCGGATGGTGTATCTGACATAGGGCACTTCCACGTCTTCGTCTGACAGGTCATTACAGCACAGCTCAAACACCAGGGCTTTCACATGCTTGCCTAGCTTCTTTTTGGACACCTTGGTGACAATCTCCGTCATCGGCAGGTCCAGTCTCTCTTTGAGTTTGGCAGCAGGCATGAAGAAAGAATAGAGCATGGACACTCCCTGAGAAAGCATGGTGATCTCCAACTTATGCTCATTCTGACaaagaacagaaaaacaaaaatagggTTGGTTAACTGTACGCCAGAAACCACATGGTCGCAAACTGAAGAGGAGTTGATGAGAACGTACTTTAAAGTAGTCCAGGAACTGTCGGAGTGTCATCTCCTCTCCATTGGGCTGCAGCCCAGTGACCTCGAAGCGATCCCACAACGTCCAATCGATTTCATAGTACtTGTGTGGGAGCAGCGATGGGCTCAGAGAAGGCAAAGAAAGGCAGAGCCAAGTTCATGAAGCCATTCTTGAAAGATTCCAGCTTCTTGTGTCCTTGGACAATCTTGATGAGCTCCAGACACACCAGGCCCACCACTGCGGCCGTGGTCGTGGCGATGGCAGGAATGATCTTGCCAGCTATCAGTTTGCTCTGTATTGGGTGGTGATGAGCACCAGCATA
>TU68391
GGGGAGTTTTTACATGTTTATTCACTATCACACTAAGTGCTCCCATTTCAAGATCCATCTCATTGCCTTGCTCTTATAATGTAATGTCATTTGGagttaaagtaaaaagaagACAGTTTATGATCTACAAGGTGTGCACCAAAACAGTCGGCCTCCCCCAccccaaaagaaaaaataaaatagaaatgaacaaaacacatgaaatataaagagaataaagagaaaaCTGATGTCATGTGCAAGAGCCCCTCCGAAGCCAGAGTGCTAGTTGAGGTGGGTGTAGTGGTGCCTCAAACCGGCAAGGGTTCATATTATGCCAGCTGAGATACTCAGATTACTTTCCAGCCAGGAGGGGCTATTGACTCTGGTTTAGCGGTGTCCTCAGGTGCTCCTACAGTTTCAAATGTGGGGTCTCGGGTAGAATTAAGGGCAAGGATACGGCCTGGTGGCAAAATGGATTTTCAATACATGTCACCATTTCTGGGATTCTTGGCTGAAATTTAATGAGGTacatctttataaaaaaaaaaagtcaggggGTCAGGTCTATGAGACAGGGGTTGGAAGAGGGAAGAGAGCAAGTAGAGTGGAGGGGAGAGAGTTGGCTGCATTAAAAAGATCCCTCCTTAAGTGCTGAAGGCTAGTAAAGAGTTTGAGGATGTTTTAGTGGGACACTGGCTGGGCTTTGGAGTACCAAGAGAACACTAATGCTTAGAATTAAACCGAGCGGAAAGGTTCTGCTACTGAGAAACATCAAGAGGTCCAGAATACATGCTCCCTTCCTTCAATGACCCCCCTGTTCCCACAGCCGACCAACAACTGATACCTAACACACATACAATTAACCTTAAATCAGCTTACTGGGGCTATGTACATTCAGGCACAGGTTTAAACAAACCACAGGCctaaaaaaaactgattgaTCCAATAGAGCTGACCTGGATCAACCCACCCATCAATCCCCAATTCCCTCCTCAAacacacacacacatacacacacacacagacacacacacagacacacacacacacacacacacacacacgcacacacacaaatacacttaCTCCCCATGTGTTTTGCTGGATTGTTTCCCACTTCCTTTTGTCGGAAGCTTaccctccctttctccctctgccATTCTGCTCGCCCCCTATCCTTTTTTCTCGCCTGCCCTCTTCTACCTCCCTCCGTCATCAGCATCACTCACTCAGTCACTCTCAATCTCTGTTTTTCCCGTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68390 True 1683 lncRNA 0.46 3 19698081 19700647
TU68391 False 1244 lncRNA 0.45 3 19698081 19758691

Neighbor

gene id symbol gene type direction distance location
wnt5a wnt5a,LOC103367232,LOC102799772 coding upstream 282891 19366783 ~ 19415190 (+)
LOC120559318 NA coding upstream 370527 19241532 ~ 19327554 (+)
tlr9 NA coding upstream 457472 19235549 ~ 19240609 (+)
apeh NA coding upstream 462695 19225260 ~ 19235386 (+)
LOC120559315 LOC103367228,LOC104955723 coding upstream 477146 19205219 ~ 19220935 (+)
LOC120558919 LOC104941542 coding downstream 33489 19792180 ~ 19793225 (+)
LOC120558889 LOC104931868,LOC102202682,LOC102797917,LOC108235291 coding downstream 160703 19919394 ~ 19925436 (+)
kcna2b LOC104931876,LOC104941545,LOC103149635,LOC106925543,LOC107087053 coding downstream 183333 19942024 ~ 19951021 (+)
LOC120558887 LOC103360394,LOC100692715,LOC101485468,LOC102788976 coding downstream 214512 19973203 ~ 19976195 (+)
ube2t ube2t coding downstream 242458 20001149 ~ 20004112 (+)
G51201 NA non-coding upstream 9373 19688459 ~ 19688708 (+)
G51200 NA non-coding upstream 10653 19687018 ~ 19687428 (+)
G51184 LOC100696538,LOC103362809,LOC108265463,LOC108411640,LOC105006799 non-coding upstream 11247 19681858 ~ 19686834 (+)
G51198 LOC104956301,LOC100694066,LOC101464052,LOC102311528,LOC102199933 non-coding upstream 12464 19684527 ~ 19685617 (+)
G51183 NA non-coding upstream 16314 19679498 ~ 19681767 (+)
G51218 NA non-coding downstream 3486 19762177 ~ 19762479 (+)
G51220 LOC105935863,LOC107390966,LOC108235152 non-coding downstream 10384 19769075 ~ 19801577 (+)
G51221 NA non-coding downstream 19377 19778068 ~ 19805293 (+)
G51282 NA non-coding downstream 232082 19990773 ~ 19992193 (+)
G51283 NA non-coding downstream 237190 19995881 ~ 19996116 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 234369 19456477 ~ 19463712 (+)
G50983 LOC103366028 other upstream 1011779 18682143 ~ 18686302 (+)
opn7b LOC103364157,LOC103467481 other upstream 1397748 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 1911683 17741371 ~ 17786398 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other upstream 2500908 17185911 ~ 17197173 (+)
LOC120558920 LOC104941542 other downstream 8935 19767626 ~ 19768564 (+)
zgc:194242 NA other downstream 237786 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 305301 20063992 ~ 20065735 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 687280 20445971 ~ 20532569 (+)
G51716 NA other downstream 1530897 21289588 ~ 21290962 (+)

Expression


Co-expression Network