G51186


Basic Information

Item Value
gene id G51186
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19651234 ~ 19658721 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68397
ggcaTTGGGTTAATCTTTTTAATTCAGCACAACACAGGTAGAACAGGATGACACCAGTGACCTGGAAAGCAGTAACATTGTGTGATGCCATTGTGGCCAGGAATGCTCAACGGTTCACAACTAAGAGGTTTAACTTTTCACACCATCTGAAGAAACTGTTCTCTACCACAGCCAAGCGTCAAAGCTGGGACTGATCACTACAAAACTGATAGTACATACATGTATGACAACAGTAATAGTGCTTcttcaaaacaaaaaaggaggCATGAGTGCCAGCTGAGTGAGAAGACATGAGGCATGGTTGTAAGGAATGTGAAAAAGAAAGGATTGTTGGAATGCAGAACAAAAGTTGTGGCCTGACAGTTCAAAATGGATCAGAACCAGGACAGCTTACCATACAGCTGGTATGGTAAGCTGTCAACATACCACATTTACAGTATTCTGTGAGGCTTTTGTTTGAACTACTAGCAAGGAATTTGGAAAACATGATAAAAGAAAGGAATGCTGCAGAAGAGGGTACTAGACACTGCAAACCGGGAGAGTAATATTAACACTACAGGAGTCGACAACACTCTACTTCTTACCGATGGAGATCCCACAGTGGGACCCTACCAGGTTGACATTTGACTGGGAGATGGCTCCCATGCGGATCTGGTCATAGGCTCTAGAGAAGAAGGCAGCAAACGTGCTGGCAAATGCAACTGTGCGGTCACGGGTGCCACAGCCAATGGCCACTCCCACCTGCAGCAAGTAAAGACAGTTAATCAGAGTTAGTCTTAATGAAAGCAAACAG
>TU68398
ggcaTTGGGTTAATCTTTTTAATTCAGCACAACACAGGTAGAACAGGATGACACCAGTGACCTGGAAAGCAGTAACATTGTGTGATGCCATTGTGGCCAGGAATGCTCAACGGTTCACAACTAAGAGGTTTAACTTTTCACACCATCTGAAGAAACTGTTCTCTACCACAGCCAAGCGTCAAAGCTGGGACTGATCACTACAAAACTGATAGTACATACATGTATGACAACAGTAATAGTGCTTcttcaaaacaaaaaaggaggCATGAGTGCCAGCTGAGTGAGAAGACATGAGGCATGGTTGTAAGGAATGTGAAAAAGAAAGGATTGTTGGAATGCAGAACAAAAGTTGTGGCCTGACAGTTCAAAATGGATCAGAACCAGGACAGCTTACCATACAGCTGGTATGGTAAGCTGTCAACATACCACATTTACAGTATTCTGTGAGGCTTTTGTTTGAACTACTAGCAAGGAATTTGGAAAACATGATAAAAGAAAGGAATGCTGCAGAAGAGGGTACTAGACACTGCAAACCGGGAGAGTAATATTAACACTACAGGAGTCGACAACACTCTACTTCTTACCGATGGAGATCCCACAGTGGGACCCTACCAGGTTGACATTTGACTGGGAGATGGCTCCCATGCGGATCTGGTCATAGGCTCTAGAGAAGAAGGCAGCAAACGTGCTGGCAAATGCAACTGTGCGGTCACGGGTGCCACAGCCAATGGCCACTCCCACCAAGTTCTGTTCAGCAATGAAGCACTCAATGTAGCGGTCAGGGAAGGCTTTCTTGAAGGTCTCTGAGAAGGTAGAGTTTTTGGTGTCTCCATCGAGGGCCACCACTCTCTTGCTTGCCTGGCCCAGCTTGGCCAGTGCCAGGCCGTATGCACGCCTTGTTGCCATctTTTCTCCCATTTTGAATGCTGGGGGTGAAGGCATGGAGATGGTGCTAAGGTCTGCAGGTGCCGTGTCATCTTTGGGCAGTTCAGGGCACACAGTCTTGTTGGGGACCTGGATCTGAGCCTGGAGGTCTTTTAGGATGTCATCCACCCTGTCCTTAGGGATAGGCTTTCCATGCCAATTATCAAGATCCTCAATTTTTGAGTCCCTTGCCCTTGAATGTTTTGGCTACAATGCAAGTGGGTTTGTCCTTGACCTGCTGAGCCTGCCAGAACGCTTTGCACAGCTCCTCAACATCATGTCCATCCACAACATACGTGTTCACCCAAAAGCTTCACAGCGCTTGCGGTAGGTCTCCATGTCGTGCTTCAGGGGTGCGGCCTCACTCTGACCGAGCCGGTTGACATCCATGATAGCCACCAAGTTGTCCAGCTTGTAGTAGGAGGCAAAGGCCATGGCCTCCCACACAGAGCCCTCTGAACACTCTCCATCACCCATCATGCAATACACACGGTAACTACAACACAATGTAGAAAGGGGAAACAATgatgaataaaacatttaacagtAGTTACACGATCAATAAAAGTCTGTTGAGTTGAGATTCGTGACCTACCCATGGGAAAGTGAAAGGTCATTAGACTCCACTCAGCACAGAATAGGTCACTGTCTTGAGTGAAGAACATTACAGTCGATGTAATCTATAAGAAACTAGTCATGAGCCCCATCACTTGTTCTGAACCAGAAACTAAATTAGAAGCAGCAATTCATACCGATTGCCATCTGTACCGTTTGCCCCTATTAAGTAGTTAGGAATAGGGATGCAACGAATATAGATTGTTGGTACAATTAGTCTGAAAAATAATCCTGGTTTTACGATTACGCATTAATTAATTTCACTGctaattagtgctgtcaaacaattaaaacatttaatcgCATTATGTCAGTTAACTCTCAACTAAGCGCACAGAATTCGCATCAGcagtgtgcttggccatcagtgGCATTTCAGactcaatgaaaaaaaaaaaaaaaaacacagatcactttagtcttgtcaatggaaccatttggcaactttttaaaaactttccattcagaatctaaTTGCCATTCATTTCGGTGTCtcacgctcgccatccactcaaaacgtaacatTACCTACTACTCTCTGGctggctcgcaagcccaaacaagcgTGTGCGGCGTGCcggttttgtttccggtctagctagatccgatGTGGTGTTTTAGTGTTCTTAacattactagttgttgcaacagcatgtgactAAATAACACTCATGAATGCTCAtcttgtgattaaaaaaaaaaaaaagtatatgatcaacctttttatttaaattcatcTGAAAAGGTTAGAGATTAGAGGTGAATCAGTCACATCACAAACAAAGGCCAAGTTGGCAATAACCGTGCTGTCCTTAAGAGGTTGGCCCTTTTTGGGTCCTGCTAGCTGGCGTGTCTAAAAGTAGGAGGAGCTGCTAGACCAGATGCAGCTGTCACAGGGAGATGTGCAGCATGTTGCCAAGGAATAAATGCAATGGAGAGATCTTTCCAGCCTCATGTACCACAGGGGATGATGATTAAGTAATGTTTAGTGTTAACGTCCGTGACATGTTTGAGCGGTTGGAGTTTTGACTCGTACGAATGTAACCATCATCAGCTCGCTCATTGTAAATGCAAACGTTGGCTTCTGACTCGTTAGCCATTTACTGCAACGTTACTGTTAAACAGGCCAAAGTTACGTTAAACAGGCCAACGTTAGCCAACTGGTAACCTTAACAAGCTAACAAACACTTAACGTTACACCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68397 False 793 lncRNA 0.44 2 19651234 19654257
TU68398 True 2742 lncRNA 0.44 6 19651234 19658721

Neighbor

gene id symbol gene type direction distance location
wnt5a wnt5a,LOC103367232,LOC102799772 coding upstream 236044 19366783 ~ 19415190 (+)
LOC120559318 NA coding upstream 323680 19241532 ~ 19327554 (+)
tlr9 NA coding upstream 410625 19235549 ~ 19240609 (+)
apeh NA coding upstream 415848 19225260 ~ 19235386 (+)
LOC120559315 LOC103367228,LOC104955723 coding upstream 430299 19205219 ~ 19220935 (+)
LOC120558919 LOC104941542 coding downstream 133459 19792180 ~ 19793225 (+)
LOC120558889 LOC104931868,LOC102202682,LOC102797917,LOC108235291 coding downstream 260673 19919394 ~ 19925436 (+)
kcna2b LOC104931876,LOC104941545,LOC103149635,LOC106925543,LOC107087053 coding downstream 283303 19942024 ~ 19951021 (+)
LOC120558887 LOC103360394,LOC100692715,LOC101485468,LOC102788976 coding downstream 314482 19973203 ~ 19976195 (+)
ube2t ube2t coding downstream 342428 20001149 ~ 20004112 (+)
G51178 bgn non-coding upstream 26240 19620441 ~ 19624994 (+)
G51174 bgn non-coding upstream 33024 19617115 ~ 19618210 (+)
G51165 LOC103362816 non-coding upstream 42278 19571193 ~ 19608956 (+)
G51168 LOC102792445,LOC100695140,LOC103362820,LOC104933206,LOC101467308 non-coding upstream 57610 19591468 ~ 19593624 (+)
G51167 LOC101075728,LOC104965662 non-coding upstream 60258 19588235 ~ 19590976 (+)
G51194 LOC104956217,LOC103362813 non-coding downstream 10900 19669621 ~ 19671527 (+)
G51183 NA non-coding downstream 20777 19679498 ~ 19681767 (+)
G51184 LOC100696538,LOC103362809,LOC108265463,LOC108411640,LOC105006799 non-coding downstream 23137 19681858 ~ 19686834 (+)
G51198 LOC104956301,LOC100694066,LOC101464052,LOC102311528,LOC102199933 non-coding downstream 25806 19684527 ~ 19685617 (+)
G51200 NA non-coding downstream 28297 19687018 ~ 19687428 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 187522 19456477 ~ 19463712 (+)
G50983 LOC103366028 other upstream 964932 18682143 ~ 18686302 (+)
opn7b LOC103364157,LOC103467481 other upstream 1350901 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 1864836 17741371 ~ 17786398 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other upstream 2454061 17185911 ~ 17197173 (+)
LOC120558920 LOC104941542 other downstream 108905 19767626 ~ 19768564 (+)
zgc:194242 NA other downstream 337756 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 405271 20063992 ~ 20065735 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 787250 20445971 ~ 20532569 (+)
G51716 NA other downstream 1630867 21289588 ~ 21290962 (+)

Expression


Co-expression Network