G51194 (LOC104956217,LOC103362813)


Basic Information

Item Value
gene id G51194
gene name LOC104956217,LOC103362813
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19669621 ~ 19671527 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68408
TCAGAGAGCTGTTGGTGCCTGATGAGGGCCTCCTTGCTAGGGAACTGCCTCCTACACAGCAGACAGGCCAGTTTAACCCAGTCTGTCATTCTCCCTTCCTTCTCCTCTTTGTCACCTCCTTCTTCTTCGCTATCAGTTTCGCCACTGTAGGCTGGGACCAGACCCTGCTGCTGAGGAGGGGAACGTTCTGTACTTTGTCGGATCTGGTCCAGAAAAATCTGAGGCCGTTCAGACAGCGCGCCCTTTTTCTCCAGAACCGCATAGCCTGCATCAGCACTAGCAGATTCTCGACGGTCATCTAGACGACTGTGGCCAGGTGCCCTAGTGTAACCAGGTGGTAGTGATGTGGAGCCAacggcaggggaggaggaggagacagagcgCATGTTCTCCTTGTGTCGGTTGAGACTCTTAGCCCAGCGCTCCATATCTTTGGCAATCTGTTGAGCAGTTTTATTCTTGggtttctctttcttctccttgCTCCCAAGAGTAGCAAATGGTGAGTCTGAAGGGACTGCACCAATGCTCGTGGGAGAACCCTCTGAGTTTGACTGGCCGGCAGCAGCAGGGATGTAAGTGTGCTTTTCTCCATCCCAGTACATGTACTGCTGAGTGTGAGGGTTGTAATAGTACTGCACAGAGGGGCACACAAAACCAAACTGAAATGCTGAGGGagaggatacattcagaaaggTCATTCAAAGAATGCTGGCTTGACATTTAGACTGCAGTACATTCACAACTCTTTACCTGGGAGTTTGGGTCATAGTAGAGGCCTGTGAGTGGGTCGTAATAGTAGCCAGAGCTTTCATCATACTGGTATGTCGAAACATCTGGCACAGCTAAAGTCAAAGACACAGGACATATACCTCAGTGTAAGATATCAA

Function

NR:

description
PREDICTED: RNA-binding protein 10-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68408 True 890 lncRNA 0.50 4 19669621 19671527

Neighbor

gene id symbol gene type direction distance location
wnt5a wnt5a,LOC103367232,LOC102799772 coding upstream 254431 19366783 ~ 19415190 (+)
LOC120559318 NA coding upstream 342067 19241532 ~ 19327554 (+)
tlr9 NA coding upstream 429012 19235549 ~ 19240609 (+)
apeh NA coding upstream 434235 19225260 ~ 19235386 (+)
LOC120559315 LOC103367228,LOC104955723 coding upstream 448686 19205219 ~ 19220935 (+)
LOC120558919 LOC104941542 coding downstream 120653 19792180 ~ 19793225 (+)
LOC120558889 LOC104931868,LOC102202682,LOC102797917,LOC108235291 coding downstream 247867 19919394 ~ 19925436 (+)
kcna2b LOC104931876,LOC104941545,LOC103149635,LOC106925543,LOC107087053 coding downstream 270497 19942024 ~ 19951021 (+)
LOC120558887 LOC103360394,LOC100692715,LOC101485468,LOC102788976 coding downstream 301676 19973203 ~ 19976195 (+)
ube2t ube2t coding downstream 329622 20001149 ~ 20004112 (+)
G51186 NA non-coding upstream 10900 19651234 ~ 19658721 (+)
G51178 bgn non-coding upstream 44627 19620441 ~ 19624994 (+)
G51174 bgn non-coding upstream 51411 19617115 ~ 19618210 (+)
G51165 LOC103362816 non-coding upstream 60665 19571193 ~ 19608956 (+)
G51183 NA non-coding downstream 7971 19679498 ~ 19681767 (+)
G51184 LOC100696538,LOC103362809,LOC108265463,LOC108411640,LOC105006799 non-coding downstream 10331 19681858 ~ 19686834 (+)
G51198 LOC104956301,LOC100694066,LOC101464052,LOC102311528,LOC102199933 non-coding downstream 13000 19684527 ~ 19685617 (+)
G51200 NA non-coding downstream 15491 19687018 ~ 19687428 (+)
G51201 NA non-coding downstream 16932 19688459 ~ 19688708 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 205909 19456477 ~ 19463712 (+)
G50983 LOC103366028 other upstream 983319 18682143 ~ 18686302 (+)
opn7b LOC103364157,LOC103467481 other upstream 1369288 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 1883223 17741371 ~ 17786398 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other upstream 2472448 17185911 ~ 17197173 (+)
LOC120558920 LOC104941542 other downstream 96099 19767626 ~ 19768564 (+)
zgc:194242 NA other downstream 324950 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 392465 20063992 ~ 20065735 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 774444 20445971 ~ 20532569 (+)
G51716 NA other downstream 1618061 21289588 ~ 21290962 (+)

Expression


Co-expression Network