G51218


Basic Information

Item Value
gene id G51218
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19762177 ~ 19762479 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68438
GCGGAAGCTCATTGTAGAGGTCACATGCTGAGTGCTCGTCACTCCACCAATCACCTCGGGGAAGGTCTGAGACAAGAGCCAATAGTTACCCTCGCAGGGTATCACCTGATACGGGTGAGCGAGTGAACAGAAAATATGGGTCAATGTGAGCGTTGATCAGGAGAAGCTGTGTGGTGCAGTTTCTCAGCGCCACACAGTGGATGTGACGCTTACTGACTTGGAATCGCTCGCGGCTGGCAAATGAGTGCGATGTATGAGGTGGGGCACAGCTCCAGAACCCAATTCAGACTACTCTCCCCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68438 True 303 lncRNA 0.54 1 19762177 19762479

Neighbor

gene id symbol gene type direction distance location
wnt5a wnt5a,LOC103367232,LOC102799772 coding upstream 346987 19366783 ~ 19415190 (+)
LOC120559318 NA coding upstream 434623 19241532 ~ 19327554 (+)
tlr9 NA coding upstream 521568 19235549 ~ 19240609 (+)
apeh NA coding upstream 526791 19225260 ~ 19235386 (+)
LOC120559315 LOC103367228,LOC104955723 coding upstream 541242 19205219 ~ 19220935 (+)
LOC120558919 LOC104941542 coding downstream 29701 19792180 ~ 19793225 (+)
LOC120558889 LOC104931868,LOC102202682,LOC102797917,LOC108235291 coding downstream 156915 19919394 ~ 19925436 (+)
kcna2b LOC104931876,LOC104941545,LOC103149635,LOC106925543,LOC107087053 coding downstream 179545 19942024 ~ 19951021 (+)
LOC120558887 LOC103360394,LOC100692715,LOC101485468,LOC102788976 coding downstream 210724 19973203 ~ 19976195 (+)
ube2t ube2t coding downstream 238670 20001149 ~ 20004112 (+)
G51182 NA non-coding upstream 3486 19698081 ~ 19758691 (+)
G51215 NA non-coding upstream 42740 19716772 ~ 19719437 (+)
G51212 NA non-coding upstream 47498 19712766 ~ 19714679 (+)
G51206 uba1 non-coding upstream 54677 19702097 ~ 19707500 (+)
G51201 NA non-coding upstream 73469 19688459 ~ 19688708 (+)
G51220 LOC105935863,LOC107390966,LOC108235152 non-coding downstream 6596 19769075 ~ 19801577 (+)
G51221 NA non-coding downstream 15589 19778068 ~ 19805293 (+)
G51282 NA non-coding downstream 228294 19990773 ~ 19992193 (+)
G51283 NA non-coding downstream 233402 19995881 ~ 19996116 (+)
G51317 NA non-coding downstream 395310 20157789 ~ 20171119 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 298465 19456477 ~ 19463712 (+)
G50983 LOC103366028 other upstream 1075875 18682143 ~ 18686302 (+)
opn7b LOC103364157,LOC103467481 other upstream 1461844 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 1975779 17741371 ~ 17786398 (+)
G50523 slc6a6,LOC104935489,LOC101165803,LOC100694392,LOC102780524 other upstream 2565004 17185911 ~ 17197173 (+)
LOC120558920 LOC104941542 other downstream 5147 19767626 ~ 19768564 (+)
zgc:194242 NA other downstream 233998 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 301513 20063992 ~ 20065735 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 683492 20445971 ~ 20532569 (+)
G51716 NA other downstream 1527109 21289588 ~ 21290962 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G34595 NA non-coding CI01000004 null 15697005 ~ 15700776 (-)