G51221


Basic Information

Item Value
gene id G51221
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19778068 ~ 19805293 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68451
GTTTCATCTCCAGATTTGCACAACTATAACTGAGTAACACAACAGCTTTTGTGGATTGAGGTGCACTAAACTGTTCCTAGTTCATCCTGTTTTAACTCCACAGAATGACAGTGAAGTGACTCTGTTGTGTCTCATCACTCCTCAGAGTAAACACTGTCTGCTGGAGTGGTAAGAAAGCCTTGGTGGTCTCCTCACTTGTCTCACATTACATTGAAatctgtaaataaaaaataagagaaTGACCAGGGCCCGTGTTCCACAGAGTCTGATTATTCTTTTATGACCAATAGACTTTTAAAATAGTTGGCAGACAAATTGTCGATTTACCACTTCAACTCTCTTGACAATGAAGACACAGTCGAGTTTGACACTGAAACACCAAAATAATAATGGCAAGTCCAATGTGTGTGACAATTAATTGCAGTCCAACTCTACAAACATATGTACATCTTTTGCTACGTTCAAACAGCCCATTGTTCAAAAATAGCTCGTTATCAAAGAAAGGCACATTAAGAAGCTGTTTTAGTTGCGTTGATTTGCTTTGACTATTGCACTGTCATGACTACATGAACACTGTACAACTACTGCAAGCCTCTGTCTACACATTAAATCGTAACTATCACATCAACCACAAATAATGTACAACTACAGAAAACTCACACATATTTACATACCAGAGTCCCGTAATAAACCCAACAGTGGCCTGATTGAACCTGGATCAATGGAAGTGATTCAAGATGGGCATGTCTGTCCAATCCTCTTATCTGCCGAGATTGATGAGATGTGAGGAATACAGGGGTTATTTctcactttttgttttgttgtgggtGGTGTACTTTTAAGgcacagaggggaaaaaagatgGAGATAGGAAAAGATCAAAGGCCTGGCTTGGATAACAAAATTCCACAGCCCCACTGCCTATTCTAGCATATATTTAGCCTGTCCacatgactttttgacatacagtCAACAAAGACTCGAGGATACTCTCTTAGGTAAGAgagattatatatattaatatatacaaGGAGCTTTTCCTTTGTGACGAAAGGGAATTTGGTTTTCAGTTCAGCTGGATTGTGCTTTGATTCTTGGATTTACTTTTCCTGTAGGcaagtttttttctgtttcatagAAGACTCTTGAAACTTGCTTGAGTTGTGTAACACACCACATACTGGCATTGCAAGAAAAATATGAAGTCTGCATGATTTGTTGTACAGTAAGTGGACTAAAATGTGGTTATAGTTGCTTAACAATACTACTATCATGTCTGtaaagtaaatatgaagctacagccagcagctgttaGTTTAGCTTAGTATAAAGACAAAGCCAGGATAGCTGTTTCCCCGctttttccagtctttgtgctaagctaagctaactgtgggctgcagcttcatatttaccgacATGATAGTGCTATCAATCTTCtaatctaactctcggcaataAAGTTATCCCAAAATATatattccaaaatgttgaactaatcCTTTAAGATAGCTGCACATTTTTGTCATTGTACACacagtttacagtgtgtgtgtatacggtATGTGTGTGAGTAAATTCACTGGGGATGCATTCCCGAAACGTTCACTGGCCATTCCCTCTCTCTTGAAACCCCACTCTGATTCCACCAATCAGTATTCCCTACGAGATTCCTGACAACCTTTTTTAAGGCTGTGGTCTCACGTAACACAACATtgctgtgcttgtgtgtctgtgcgcgtTCATGTGTGTCTTAATTTGGGTGCACAGATAAGCAAACTCAGCTGCTTTCCCCTCAGATTGCTCTCTCAGGGCCAAAGTTTCCCACAGCCAAGGGGTCAGTGTCAATGCTGTGTGAAAAAGCATTAACACTACTGCTACAGTATGTCGGTTAAAATTTATAATGGCAGCCAAATGCCATGAGGAAAAAACTATTTGACAGATTGTCAGGTCAACATCAGACATTATACTGTTCCCACTGTGTGGATAGTTATGAAAGTAGAGCATGCTATTTTGCTCGTgactgcaaataaataaataacatttcagagaaaataGTGGAAGATCAGGCCAAAAGAGCTGGTTTGAGCACCATAGTGgaaaggattttcttttttaacatgaTCTATTTCCCAGGTCCCTGAATGGACAAAGGTTGACTTTGGATCTAAAGGCTGTACAGTCTTTCAGGGCTAGGTACAGGAGGGGCAGAGTTCAAGTATCCAGCTTAGATGACCTCTCTGCTGTTGCGAATGGCACAACAGAGCACCATACTGAAGATCATCCCAAtgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68451 True 2293 lncRNA 0.40 2 19778068 19805293

Neighbor

gene id symbol gene type direction distance location
wnt5a wnt5a,LOC103367232,LOC102799772 coding upstream 362878 19366783 ~ 19415190 (+)
LOC120559318 NA coding upstream 450514 19241532 ~ 19327554 (+)
tlr9 NA coding upstream 537459 19235549 ~ 19240609 (+)
apeh NA coding upstream 542682 19225260 ~ 19235386 (+)
LOC120559315 LOC103367228,LOC104955723 coding upstream 557133 19205219 ~ 19220935 (+)
LOC120558889 LOC104931868,LOC102202682,LOC102797917,LOC108235291 coding downstream 114101 19919394 ~ 19925436 (+)
kcna2b LOC104931876,LOC104941545,LOC103149635,LOC106925543,LOC107087053 coding downstream 136731 19942024 ~ 19951021 (+)
LOC120558887 LOC103360394,LOC100692715,LOC101485468,LOC102788976 coding downstream 167910 19973203 ~ 19976195 (+)
ube2t ube2t coding downstream 195856 20001149 ~ 20004112 (+)
LOC120558918 LOC103360403 coding downstream 253821 20059114 ~ 20061812 (+)
G51218 NA non-coding upstream 15589 19762177 ~ 19762479 (+)
G51182 NA non-coding upstream 19377 19698081 ~ 19758691 (+)
G51282 NA non-coding downstream 185480 19990773 ~ 19992193 (+)
G51283 NA non-coding downstream 190588 19995881 ~ 19996116 (+)
G51317 NA non-coding downstream 352496 20157789 ~ 20171119 (+)
LOC120558477 NA non-coding downstream 856004 20661297 ~ 20662553 (+)
G51386 NA non-coding downstream 946302 20751595 ~ 20752345 (+)
LOC120558920 LOC104941542 other upstream 9504 19767626 ~ 19768564 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 314356 19456477 ~ 19463712 (+)
G50983 LOC103366028 other upstream 1091766 18682143 ~ 18686302 (+)
opn7b LOC103364157,LOC103467481 other upstream 1477735 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 1991670 17741371 ~ 17786398 (+)
zgc:194242 NA other downstream 191184 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 258699 20063992 ~ 20065735 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 640678 20445971 ~ 20532569 (+)
G51716 NA other downstream 1484295 21289588 ~ 21290962 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other downstream 1555997 21361290 ~ 21364430 (+)

Expression


Co-expression Network