G51282


Basic Information

Item Value
gene id G51282
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 19990773 ~ 19992193 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68534
CCTGAGGTTTTGGGGTGGCAAAGATCGTTAACGTCTTGCAAAGCTGAATGTTATTCACAACTTTTATTACCAAATAGGCCTACTAGATTATTCAGACTAATAGTAACCAGGGCATACAAAATATGCAatacaaaatgtttattttacaaAGCAGAAAAAACATTGACAATTAACATAGGTCTAGGCTATACCAACTTATGCTATATGCAACTTAACAAATACCTCATCTTGAGGTTGATTAAGCAAAcaatttgtaaaaacaaaacaaaactgtacAAACTGGCATTTAACCAGCAACACTATATGTTTTTGtatgaacacaaacaaaatcaCTTCACCCTGCCTCTTCCTATTTAAACAACAATCTGCAATTTCAACGTAATTTCCAACACCTACAGTACCTGCAAGACCTtcagtatatagtatataaaaatAAGTGCATCTGTTGTATTGCGGTTATGTTGAGCAAGCCTGAGAAATCTAAGTTATTATGATCCTTTTCCCATTTGAATATTGATGTGATGTCTTTCAGAGTTTTCCTCGCCCCTTAATATTAGTGTTTGTTCTGATCCCATTGATAGATACTTTTATTCACAGCAAAACGAAAAGCAATATCATtgtgaaaaaactaaaaaaatacagtGCATTTTGTTAAGCCTGTACATGCATGGGTTATTTTCTGAGCACATCTATATTATAGTCTGTAATcatttgtgttgttgtattgTGTTTAGGACATTTAATAAATAGTTTTCTGTTCTATTGAGGATGCTGTGGAGAAGTTACCTTTCACGCCAGCTGGATTCTCGCGATATCACGTGGGAATCGCTGAATCACATATTACACAAAAATCCTTCTTatcaggcttcaagtaatgcatTTGCAGCTACAgacgtggtttaggtgtgtgtgatgaCCACGACAATTCAATTGTTCAAAAAACAATTGTGGACGTGATAGACTCCTCAtctaccagttttttttttaaagggcccgcccttttccaaacagtttccaatgacggcttctcagatggttctgtgtaacaaatcATGTGGTGCGTCAGGTTAGTGGAGAAGCACGATCAGGGGAAACCTCAAAATGGTCCTCACTGAACTCATGTGTAGGACTGCTGTCTGGAAAATCTCCGTTCTGAGATGGAGTGTGTTCCAGGGACACGGCAGGGTCAGCCTGCGCTCTCTTGGTGTCCTGTGGGAGTTTCAGAAACCTGAGGGGAGTCAGACAAGAGGCAATaacaataaatgtgtgtgtctttgtgggaAAAGACAGGAGGAGAATGAGACTAAGAAAAAGGGACAGACACCTGAAGAGAAGTTTTTGTCCTCGCTcctttttgatgatgttgagCTTGTAGTAGTGCCGCAAAGCCCGGGACATTTTCTCATAGGTCATATTGTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68534 True 1421 lncRNA 0.39 1 19990773 19992193

Neighbor

gene id symbol gene type direction distance location
LOC120558887 LOC103360394,LOC100692715,LOC101485468,LOC102788976 coding upstream 14578 19973203 ~ 19976195 (+)
kcna2b LOC104931876,LOC104941545,LOC103149635,LOC106925543,LOC107087053 coding upstream 39752 19942024 ~ 19951021 (+)
LOC120558889 LOC104931868,LOC102202682,LOC102797917,LOC108235291 coding upstream 65337 19919394 ~ 19925436 (+)
LOC120558919 LOC104941542 coding upstream 197548 19792180 ~ 19793225 (+)
wnt5a wnt5a,LOC103367232,LOC102799772 coding upstream 575583 19366783 ~ 19415190 (+)
ube2t ube2t coding downstream 8956 20001149 ~ 20004112 (+)
LOC120558918 LOC103360403 coding downstream 66921 20059114 ~ 20061812 (+)
tead3a tead3,LOC106925412,LOC103467419,LOC102294501,LOC100690839 coding downstream 87080 20079273 ~ 20095601 (+)
LOC120558885 NA coding downstream 108719 20100912 ~ 20119745 (+)
LOC120558875 NA coding downstream 181964 20174157 ~ 20271307 (+)
G51221 NA non-coding upstream 185480 19778068 ~ 19805293 (+)
G51220 LOC105935863,LOC107390966,LOC108235152 non-coding upstream 189196 19769075 ~ 19801577 (+)
G51218 NA non-coding upstream 228294 19762177 ~ 19762479 (+)
G51182 NA non-coding upstream 232082 19698081 ~ 19758691 (+)
G51283 NA non-coding downstream 3688 19995881 ~ 19996116 (+)
G51317 NA non-coding downstream 165596 20157789 ~ 20171119 (+)
LOC120558477 NA non-coding downstream 669104 20661297 ~ 20662553 (+)
G51386 NA non-coding downstream 759402 20751595 ~ 20752345 (+)
LOC120558354 NA non-coding downstream 780260 20772453 ~ 20779399 (+)
LOC120558920 LOC104941542 other upstream 222209 19767626 ~ 19768564 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 527061 19456477 ~ 19463712 (+)
G50983 LOC103366028 other upstream 1304471 18682143 ~ 18686302 (+)
opn7b LOC103364157,LOC103467481 other upstream 1690440 18255892 ~ 18300333 (+)
LOC120559485 lime1,LOC103354460,LOC103467936,LOC105926125,LOC107096010,LOC103141841 other upstream 2204375 17741371 ~ 17786398 (+)
zgc:194242 NA other downstream 4284 19996477 ~ 20000438 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other downstream 71799 20063992 ~ 20065735 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 453778 20445971 ~ 20532569 (+)
G51716 NA other downstream 1297395 21289588 ~ 21290962 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other downstream 1369097 21361290 ~ 21364430 (+)

Expression


Co-expression Network