G51317


Basic Information

Item Value
gene id G51317
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 20157789 ~ 20171119 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68590
GCAAATTTCAGATTGAGAAACAAATAGTAAGGTTCTCTTATAAGACTCAATAATTTACACCACTGTTAAAATTTCATACTGGAGGATATCTTTCATATAGGGAAATTTTCATACTTATAAGTATTAAAGCATGCATGCAACAACACTATCTTGGATTTTTTTAAGCATCTATGCATGATGCCTAttacagcatttttttattACGCTATTCCACCTAGCCatatacatttttctttgaGAATAGATGAGCAACAGTTCACATTAGGTTAGTATTACTTGTGACTGTAATGACAAGTGTCCGAAGTTCAGCAGGTTCCTCGTTGACAATGACAGGAAGCAACAAAGAGTTTACTTACTGCACAGGAAGCAGGACTTGTGGAAGCTCCGCCCATCACAAAGGACCTCTTCTGCAAAGTAAACTGTCTTCTGACAGCGGCCACACTTGTTTCCCCCTCCTAATGGCATCCTTTAGTAATGCATGCAGcCTGCAGTTAGTAGGTGCTGTCAGTCAGTGATGATGTACAGGTTGAAGTTTTTCTCCCTGATCTGAGACATGCACCACTGGGGTGTGTTCAGAAAACCAGCAGTCCAACGTTAGGTGGAGGAGTTGTACTTTTAGCCTGCAGGAGAAAAGTAGCTTCTCTTACTAACCCAAATGTTATGACTTTATCCGAGACTCAGACCACGTTGATGGTATGTGCCTGTCCACTTTTCCGCTGTTCCAGACGTGCTCTTTTATGGAGGAgcttctgttgttgctgctgcttcaGTCTGCACACTATGGCGTGTTGAGCAACAGGGGAGTTTCTGACTgactagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
>TU68592
ATACTGTTCATATAAAATGTACACATCCTGAAATAATAGTATGGCAATAATAGGCATGTTTGAAACGAATGGCAGGACTGAATGTAATGATTAAAGTTAAACGAAGTGGAGACATGGTCACGATGTTCATAACAAACAAGCCTAGCTTATTACTCTGAGGACTTTACTGTTCTCATTTGAGTGAACGCTTAATGGTAGGCTACTTTTAGTCATCCTTCACATGCATGACAGTAACATGGCTGACAGACAGCAGGAGAGTGAAGCTGTAATTTCCCCAACTTTGCAAGACAGCCTTATCGTCTCAGCACTGCGATGTGTCACAGCGATGTTATGAAAAGAATGGATAGGCCTACAATGAACATTGTGGCATTTCTTGAAACTTACACACAGAACGTCACCTTTCAATACTTTACTATTCCCTACAGTTTCACTCACCTGTTATTATGTAATTTCTGCACCAATTAAGAAAATCTGGCACCAAAAtctttcaactttatttattaaCAAGCTGTTTGGAAAGcataacaaagaaaagcagcatttACTCTATTATACAGAATACTGTTTAATGATAGCCTACTGAGATTTCATAagagggaaaaacaaaaaaacagtaagaGCAATGCAATTAGTCAATAAagtgttaaaaacataaataggGCTTAATGTTTCACTGTTATGTATTAAGATTTACTGTAACGGCACTAGTTATGTCTGTTCTACTATCTTTGGCCTATATGAGGCAGAAATGGTGTTATATTTCTCACTGTAGGCTACAATCTTAtaatgcagctttttttttttttttttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68590 True 854 lncRNA 0.42 2 20161419 20165215
TU68592 False 812 lncRNA 0.35 2 20157789 20171119

Neighbor

gene id symbol gene type direction distance location
LOC120558885 NA coding upstream 38044 20100912 ~ 20119745 (+)
tead3a tead3,LOC106925412,LOC103467419,LOC102294501,LOC100690839 coding upstream 62188 20079273 ~ 20095601 (+)
LOC120558918 LOC103360403 coding upstream 95977 20059114 ~ 20061812 (+)
ube2t ube2t coding upstream 153677 20001149 ~ 20004112 (+)
LOC120558887 LOC103360394,LOC100692715,LOC101485468,LOC102788976 coding upstream 181594 19973203 ~ 19976195 (+)
LOC120558875 NA coding downstream 3038 20174157 ~ 20271307 (+)
mybpha LOC103360415,LOC102302078 coding downstream 100519 20271638 ~ 20290632 (+)
LOC120558877 NA coding downstream 121603 20292722 ~ 20307269 (+)
trnah-gug_9 NA coding downstream 150392 20321511 ~ 20321582 (+)
LOC120558908 ebp coding downstream 151126 20322245 ~ 20324103 (+)
G51283 NA non-coding upstream 161673 19995881 ~ 19996116 (+)
G51282 NA non-coding upstream 165596 19990773 ~ 19992193 (+)
G51221 NA non-coding upstream 352496 19778068 ~ 19805293 (+)
G51220 LOC105935863,LOC107390966,LOC108235152 non-coding upstream 356212 19769075 ~ 19801577 (+)
G51218 NA non-coding upstream 395310 19762177 ~ 19762479 (+)
LOC120558477 NA non-coding downstream 490178 20661297 ~ 20662553 (+)
G51386 NA non-coding downstream 580476 20751595 ~ 20752345 (+)
LOC120558354 NA non-coding downstream 601334 20772453 ~ 20779399 (+)
G51625 NA non-coding downstream 1049532 21220651 ~ 21222557 (+)
G51685 LOC104932430,LOC103356918,LOC101170587 non-coding downstream 1059151 21230270 ~ 21233529 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other upstream 92054 20063992 ~ 20065735 (+)
zgc:194242 NA other upstream 157351 19996477 ~ 20000438 (+)
LOC120558920 LOC104941542 other upstream 389225 19767626 ~ 19768564 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 694077 19456477 ~ 19463712 (+)
G50983 LOC103366028 other upstream 1471487 18682143 ~ 18686302 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other downstream 274852 20445971 ~ 20532569 (+)
G51716 NA other downstream 1118469 21289588 ~ 21290962 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other downstream 1190171 21361290 ~ 21364430 (+)
G51804 NA other downstream 1387771 21558890 ~ 21559349 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other downstream 1545990 21717109 ~ 21720123 (+)

Expression


Co-expression Network