G51386


Basic Information

Item Value
gene id G51386
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 20751595 ~ 20752345 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU68681
ACTGAATGATGGTTTATTTCAGCTTGATTTGATGCAGTTACAAATAAAAACCAGGcttaaggaaaagaaaagaaaaaatctaCATAAAACCTCATTGGAATGCTTGCTTTCCATAAACACattgatgaaaaaaacaaaaaacaacgttTAAATGAAGACCCTCCATGATTTATCTACTGTACATCTCTTCTTGCAGCAGCTGTAACCTGCCACAACTGTTTGGCTGAGCAGATTAGGAGGTAAACCTGCAGCTGCCCTGTCACTTCGCTTGCTCTCCTCTCCTTGCTCTCCTCTCCTAAGTACTCAGTCTTCACATTTCAAAATCGTGATGAACGGCCATATCCACCATTGTTTGAACCAGCTCCATAGCCAcctgtaaacaaataaaaaatattcagCATACAGAAACATGCCAAATGACTATACATCCTTCCATCTGCTTTCTCCATCTTACCAAAGTTCCTGCCGCCAACGCCCCCTCCTCCGCCACCACCAAAGTTGTTTTTCATTGGGCCAAAGTTGGAGGCCTGGGGGTCGTAGTGGCCCATGTTGTTGTAGTTATTGCCGCCACCCCCACCACCGcc

Function

GO:

id name namespace
GO:0031497 chromatin assembly biological_process
GO:0006323 DNA packaging biological_process
GO:0006325 chromatin organization biological_process
GO:0006333 chromatin assembly or disassembly biological_process
GO:0006334 nucleosome assembly biological_process
GO:0071824 protein-DNA complex subunit organization biological_process
GO:0065004 protein-DNA complex assembly biological_process
GO:0034728 nucleosome organization biological_process
GO:0051276 chromosome organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68681 True 584 lncRNA 0.44 2 20751595 20752345

Neighbor

gene id symbol gene type direction distance location
nfe2 nfe2,LOC102789365 coding upstream 904 20745555 ~ 20750691 (+)
znf740b znf740,LOC100692539,LOC101474992 coding upstream 31138 20713382 ~ 20720457 (+)
csad csad coding upstream 39331 20706757 ~ 20712264 (+)
zgc:174906 NA coding upstream 45786 20700761 ~ 20705809 (+)
LOC120558879 NA coding upstream 342241 20397340 ~ 20409354 (+)
cbx5 cbx5 coding downstream 2708 20755053 ~ 20759445 (+)
calcoco1a calcoco1 coding downstream 196957 20949302 ~ 20960825 (+)
nr1d4a LOC100709437,LOC104956893,LOC101468893,LOC102785086,LOC102309972 coding downstream 255206 21007551 ~ 21019292 (+)
mfsd5 mfsd5,LOC102784782 coding downstream 268160 21020505 ~ 21023161 (+)
LOC120558837 faim2,LOC102311007,LOC103362048,LOC102784507 coding downstream 272795 21025140 ~ 21031195 (+)
LOC120558477 NA non-coding upstream 89042 20661297 ~ 20662553 (+)
G51317 NA non-coding upstream 580476 20157789 ~ 20171119 (+)
G51283 NA non-coding upstream 755479 19995881 ~ 19996116 (+)
G51282 NA non-coding upstream 759402 19990773 ~ 19992193 (+)
G51221 NA non-coding upstream 946302 19778068 ~ 19805293 (+)
LOC120558354 NA non-coding downstream 20108 20772453 ~ 20779399 (+)
G51625 NA non-coding downstream 468306 21220651 ~ 21222557 (+)
G51685 LOC104932430,LOC103356918,LOC101170587 non-coding downstream 477925 21230270 ~ 21233529 (+)
LOC120559383 LOC106096427,LOC103356912,LOC102781035,LOC101487100 non-coding downstream 525431 21277776 ~ 21288705 (+)
G51735 NA non-coding downstream 612262 21364607 ~ 21365558 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other upstream 219026 20445971 ~ 20532569 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other upstream 685860 20063992 ~ 20065735 (+)
zgc:194242 NA other upstream 751157 19996477 ~ 20000438 (+)
LOC120558920 LOC104941542 other upstream 983031 19767626 ~ 19768564 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 1287883 19456477 ~ 19463712 (+)
G51716 NA other downstream 537243 21289588 ~ 21290962 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other downstream 608945 21361290 ~ 21364430 (+)
G51804 NA other downstream 806545 21558890 ~ 21559349 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other downstream 964764 21717109 ~ 21720123 (+)
LOC120559721 cacna1s,LOC103368470 other downstream 1030872 21783217 ~ 21807914 (+)

Expression


Co-expression Network