G51685 (LOC104932430,LOC103356918,LOC101170587)


Basic Information

Item Value
gene id G51685
gene name LOC104932430,LOC103356918,LOC101170587
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21230270 ~ 21233529 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69050
CTAGTACATGGGATGGACATGCATAAATTCGGCAGCTTACATTTTGACCATGTCCCCGTCCTTCAGTATGACATCAGAGTCACTCCTCAGAGGGGAGTGATGGCATACACAGTTATTAACTGAAACACAAGTAGGAAAAGCGATACCTTTCTTCATGTCTTTTTCCTTCTTGAAGATTTTCCCAGTTTCTGCCATGATGAAGGCATCTCCCTTTTCACACAGACTGAGCACGGAGACTCCAGCCATACCTGCCCCAACCACTGTCTTCAGAGCCTATTCGCAATCTCGGCCCCCATTTTATACTTGGTGACCACCAAGTCATCGGCGATGGTCTGCTCCTGTGTCTCATCGTCTCCAGACATGTTGGCAGTGTGTCCACGAACTCAGAGTAACTTTTTCCCAAGCGGGTGTCAGTCAGTCACAGGATGGACCACGCTACTCACTGCGCCGGCCCGCCCGACTTCGGTAGACAGCCTACGGTCTCTAGATCCCGCCTGCTGCCAAAGATACACTCCGCAGTCAAGATAGTTCACGGCTTAGCTAGCTTGGTGCGTTGTCTACaacagttc

Function

NR:

description
PREDICTED: proliferation-associated protein 2G4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69050 True 569 lncRNA 0.50 3 21230270 21233529

Neighbor

gene id symbol gene type direction distance location
lrp1ab LOC103362052 coding upstream 63853 21071707 ~ 21166417 (+)
si:dkey-21c19.3 senp1,LOC102196255,LOC102311320 coding upstream 184302 21032895 ~ 21045968 (+)
LOC120558837 faim2,LOC102311007,LOC103362048,LOC102784507 coding upstream 199075 21025140 ~ 21031195 (+)
mfsd5 mfsd5,LOC102784782 coding upstream 207109 21020505 ~ 21023161 (+)
nr1d4a LOC100709437,LOC104956893,LOC101468893,LOC102785086,LOC102309972 coding upstream 210978 21007551 ~ 21019292 (+)
wnt1 wnt1 coding downstream 29519 21263048 ~ 21268246 (+)
lmbr1l lmbr1l coding downstream 61618 21295147 ~ 21308168 (+)
dhh dhh coding downstream 79023 21312552 ~ 21317922 (+)
kmt2d kmt2d coding downstream 89785 21323314 ~ 21359987 (+)
arhgef25a LOC102292298,LOC100705949,LOC101484609 coding downstream 183607 21417136 ~ 21473374 (+)
G51625 NA non-coding upstream 7713 21220651 ~ 21222557 (+)
LOC120558354 NA non-coding upstream 450871 20772453 ~ 20779399 (+)
G51386 NA non-coding upstream 477925 20751595 ~ 20752345 (+)
LOC120558477 NA non-coding upstream 567717 20661297 ~ 20662553 (+)
G51317 NA non-coding upstream 1059151 20157789 ~ 20171119 (+)
LOC120559383 LOC106096427,LOC103356912,LOC102781035,LOC101487100 non-coding downstream 44247 21277776 ~ 21288705 (+)
G51735 NA non-coding downstream 131078 21364607 ~ 21365558 (+)
G51736 acvr1b,LOC105897348 non-coding downstream 132092 21365621 ~ 21366055 (+)
G51737 acvr1b non-coding downstream 132772 21366301 ~ 21366577 (+)
G51738 LOC104956875,LOC101062677 non-coding downstream 133147 21366676 ~ 21367030 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other upstream 697701 20445971 ~ 20532569 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other upstream 1164535 20063992 ~ 20065735 (+)
zgc:194242 NA other upstream 1229832 19996477 ~ 20000438 (+)
LOC120558920 LOC104941542 other upstream 1461706 19767626 ~ 19768564 (+)
LOC120558947 lrtm1,LOC102799284 other upstream 1766558 19456477 ~ 19463712 (+)
G51716 NA other downstream 56059 21289588 ~ 21290962 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other downstream 127761 21361290 ~ 21364430 (+)
G51804 NA other downstream 325361 21558890 ~ 21559349 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other downstream 483580 21717109 ~ 21720123 (+)
LOC120559721 cacna1s,LOC103368470 other downstream 549688 21783217 ~ 21807914 (+)

Expression


Co-expression Network