G51761 (LOC103385089,LOC104932540,LOC104956873)


Basic Information

Item Value
gene id G51761
gene name LOC103385089,LOC104932540,LOC104956873
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21379001 ~ 21381249 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69145
GTCAGGCATGTCTTACATAAATCTATTTATATTTTCTAGTTCAGCATCTCACTACGTGAGGTCAGTGTGACTGACAGAACATGTGAACATATTATCTTATCTTACATTTCATGCAAGTGACACGTGGGCAAATATTGAATCCCCTACCTTCCCCTCACATTAATTGGAGACTGTTAGTTATACTTCAGTGTTGTGATGAAATATTGGTCTCTAAACTTTTGTTTaataattttaagaaaatgaaaaaccCAATTGCAAAACTGATAACTCCGTAAATCTCCCAAGGAATGCTGCAATGTTTGTCTGTTATCTGATGACCTCTAGTGGTCAATGAGAGACTTGCAAACATAAGTGGAGCGCAAACTGTTCAAAAATACAAtcctttattcaacatataCAATATTACATGTCTGTTTGTGAATTCCTTTACTGACCATAGTAATGGTGATGGTACATTATTGGCctacagaaatgtaaaaaaatacttaaaaaatgtgtcgttaaaaaaaaaagtatataaaatGTGTCTCATTGTTGAATAATTGAAAATAATACCCctatacaaaatatatttacaataaATCCAATGGTGATAAATGACAACAGTTCCAATGCTGTTAGAATATGTACAACTAAATAGCtcaatgtgtctgtgtgcagataATGAAGGCTCATTTTATATAAGTTAAATATGCTTACACAACAGGTAATGTGCTTCGGTATGAGCATGTTATTACTTACATATTTCCTGTAttcatagtaaaaaaaaaaacaccaaggcCTCCAAGGTTTTTTTGGCAATTGTTGGGAAAACCCATTTGTGCAATTTTCCTGTATATAAGAGAAAGTCCAGAATgacatcctcctcttcttctcgaTAAGATGATGAGTAATTGTGCTATGCCAGATTTTCCTTTCTGTCATGACGATGGGGGGATTTAGACAATTATGAATAAAACCCTGTGTGTGTAGAACAGGCTATAAAatctttggttttatttattctgctttggaaattaattttattagctgaacataaataaatgaataaaaaaaaagaaatataatttGATCTTCATAGTTTTCTTTTTGGGGCCTTTTGGTTGGGTACCAGAAATATGGCAGATGAAAATTAGGCTacgcaaaaaaataaaataaaaaaaaaatagcctcgggagcCAGTCTAGACACTACTGCCCCAAGTCATATGGTTTTAATAGAATACAGTGACTGTGTGAGCCATTAGCTCAAAATATGCTAATGATTTACACCTTGTGCTGTTGGAATGTGGTGCATAATCCCTTCTGGCATTTTCAATTGTTTGTCCTTGTTTcatcctgttgctctggtctaGATGTCCCTCTTGAGTTTCTCAGTGCTGAAGTCACTGTCATGGTCCAGTTTGGAGAGTGTCTTCCTCACTCGCAGGGCTGTAAGGCGGGCTGGTGGGCTCTGGTACCAACACTCCTTCATGATCTTCGCAATGGCCGACAGGATAGGGTGGGAATGGAGCCTGTTGTGCAGACTGGGCTTATGCTGGTCCACGCACACCACCTTCTTCATCTCCTCAAAGCTGGGATCTAAGGGCACCATGTCAAAGAAAGGAGGGCAGTACTCTTCCAC

Function

NR:

description
PREDICTED: serine/threonine-protein kinase receptor R3-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69145 True 1623 lncRNA 0.37 2 21379001 21381249

Neighbor

gene id symbol gene type direction distance location
kmt2d kmt2d coding upstream 19014 21323314 ~ 21359987 (+)
dhh dhh coding upstream 61079 21312552 ~ 21317922 (+)
lmbr1l lmbr1l coding upstream 70833 21295147 ~ 21308168 (+)
wnt1 wnt1 coding upstream 110755 21263048 ~ 21268246 (+)
lrp1ab LOC103362052 coding upstream 212584 21071707 ~ 21166417 (+)
arhgef25a LOC102292298,LOC100705949,LOC101484609 coding downstream 35887 21417136 ~ 21473374 (+)
slc26a10 LOC103368469 coding downstream 117457 21498706 ~ 21504920 (+)
LOC120559688 NA coding downstream 172003 21553252 ~ 21555195 (+)
c1galt1a LOC104956867 coding downstream 226090 21607339 ~ 21620201 (+)
zgc:153867 LOC107390870,LOC103467339,LOC102296328,LOC104956861,LOC105928965,LOC106950810,LOC106525009,LOC101167617,LOC102221965,LOC100708807,LOC101480989 coding downstream 356231 21737480 ~ 21746717 (+)
G51739 NA non-coding upstream 2738 21376031 ~ 21376263 (+)
G51738 LOC104956875,LOC101062677 non-coding upstream 11971 21366676 ~ 21367030 (+)
G51737 acvr1b non-coding upstream 12424 21366301 ~ 21366577 (+)
G51736 acvr1b,LOC105897348 non-coding upstream 12946 21365621 ~ 21366055 (+)
G51735 NA non-coding upstream 13443 21364607 ~ 21365558 (+)
G51811 NA non-coding downstream 196139 21577388 ~ 21578255 (+)
G51900 smc1a non-coding downstream 431363 21812612 ~ 21813631 (+)
G51902 smc1a non-coding downstream 438616 21819865 ~ 21820675 (+)
LOC120559724 NA non-coding downstream 514092 21895341 ~ 21896456 (+)
G51921 huwe1 non-coding downstream 517875 21899124 ~ 21900231 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other upstream 14571 21361290 ~ 21364430 (+)
G51716 NA other upstream 88039 21289588 ~ 21290962 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other upstream 846432 20445971 ~ 20532569 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other upstream 1313266 20063992 ~ 20065735 (+)
zgc:194242 NA other upstream 1378563 19996477 ~ 20000438 (+)
G51804 NA other downstream 177641 21558890 ~ 21559349 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other downstream 335860 21717109 ~ 21720123 (+)
LOC120559721 cacna1s,LOC103368470 other downstream 401968 21783217 ~ 21807914 (+)
G51926 NA other downstream 522293 21903542 ~ 21904077 (+)
avpr2aa avpr2,LOC105897269 other downstream 665514 22046763 ~ 22060645 (+)

Expression


Co-expression Network