G51811



Basic Information


Item Value
gene id G51811
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21577388 ~ 21578255 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU69202
agttagaacacaattaaaaacaatttaaaaacaatcaaagtcaagaataataaacaaattaaaacaagaataaaattgatagtgcagtataagaaattaaagttaataaaatagattatttaaagaaaagcaacatcaaaaagataggtctttagcttagatttaaaagaacagagttgcagcggacctgcaggtttctgggagtttgttccatatatgtggagcataaaaactgaacgctgcttccccctgtttagttctgactctggggacaataagtagacctgtcccagacgacctgagaggtctgggtgggtcagagggctagatttactaacactagcgcagtttgcgctgcgtcagtttatgcgagttcggtaatagcgcacgctatgcttccacagtttgcgtagtatttatcaaccctgacacccatcaggcaatcagcgtctttctccgcccactataccgtaaattgcgctgcaaagcggtactggtgctatgatatggctgagtgcagactgcgatattcccactgctgatgctaggactgtttgaaatgatcctgatgccaatatttgtaatgtagcgaggagtttaacaactgctggaatgggatgtgaacgctgagtgggagattcaatttcatctttgatttcttccagtaactaatattgcatggctgcttgatctgtaatgctaaatgatgttgtgttcactgacaaagtgtgattcttctgttaaaaatattttcagcctcgcctatgtcttcgtcttgctcaaattactgttgccatttcaccagcggcacaaaggtctacgaggaaactcgattgcggctggtttaaagaggcggagaatttccccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU69202 True 868 lncRNA 0.41 1 21577388 21578255

Neighbor


gene id symbol gene type direction distance location
LOC120559688 NA coding upstream 22193 21553252 ~ 21555195 (+)
slc26a10 LOC103368469 coding upstream 72468 21498706 ~ 21504920 (+)
arhgef25a LOC102292298,LOC100705949,LOC101484609 coding upstream 104014 21417136 ~ 21473374 (+)
kmt2d kmt2d coding upstream 217401 21323314 ~ 21359987 (+)
dhh dhh coding upstream 259466 21312552 ~ 21317922 (+)
c1galt1a LOC104956867 coding downstream 29084 21607339 ~ 21620201 (+)
zgc:153867 LOC107390870,LOC103467339,LOC102296328,LOC104956861,LOC105928965,LOC106950810,LOC106525009,LOC101167617,LOC102221965,LOC100708807,LOC101480989 coding downstream 159225 21737480 ~ 21746717 (+)
tmem9 tmem9,LOC107707676,LOC106572715,LOC107669678 coding downstream 198216 21776471 ~ 21780950 (+)
ribc1 NA coding downstream 245263 21823518 ~ 21827890 (+)
idh3g idh3g coding downstream 444579 22022834 ~ 22028294 (+)
G51761 LOC103385089,LOC104932540,LOC104956873 non-coding upstream 196139 21379001 ~ 21381249 (+)
G51739 NA non-coding upstream 201125 21376031 ~ 21376263 (+)
G51738 LOC104956875,LOC101062677 non-coding upstream 210358 21366676 ~ 21367030 (+)
G51737 acvr1b non-coding upstream 210811 21366301 ~ 21366577 (+)
G51736 acvr1b,LOC105897348 non-coding upstream 211333 21365621 ~ 21366055 (+)
G51900 smc1a non-coding downstream 234357 21812612 ~ 21813631 (+)
G51902 smc1a non-coding downstream 241610 21819865 ~ 21820675 (+)
LOC120559724 NA non-coding downstream 317086 21895341 ~ 21896456 (+)
G51921 huwe1 non-coding downstream 320869 21899124 ~ 21900231 (+)
G51922 huwe1 non-coding downstream 322189 21900444 ~ 21901003 (+)
G51804 NA other upstream 18039 21558890 ~ 21559349 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other upstream 212958 21361290 ~ 21364430 (+)
G51716 NA other upstream 286426 21289588 ~ 21290962 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other upstream 1044819 20445971 ~ 20532569 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other upstream 1511653 20063992 ~ 20065735 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other downstream 138854 21717109 ~ 21720123 (+)
LOC120559721 cacna1s,LOC103368470 other downstream 204962 21783217 ~ 21807914 (+)
G51926 NA other downstream 325287 21903542 ~ 21904077 (+)
avpr2aa avpr2,LOC105897269 other downstream 468508 22046763 ~ 22060645 (+)
LOC120558641 LOC103363734,LOC104967523 other downstream 511942 22090197 ~ 22094890 (+)

Expression



Co-expression Network