birc5b (LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826)


Basic Information

Item Value
gene id birc5b
gene name LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21717109 ~ 21720123 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU69283
agttaagCCTGTTTTTGCTTAAGATATGGTCAGCATGGATGTATTGGCAACCAGGTTTTACTCATATGACAAAATGTACAGTCATGATTTACGCGAGCAAAGCTTTTCAGACTGGCCATTTAGAGAGGAATGTAACTGCACACCTGAAAAGATGGCCACGGCTGGGTTTGTCCACTGCCCCAGTGAGAATGAGCCTGatgttgctagctgtttcttcTGTCTGATCGAGCTTGAGGGCTGGGAGCCAGATGATGATCCCTGAAAGACTTCACCGAGCTGACTGTGGCTGAATTCTGTCATAAGGAAAGGGAGAGGCTAAAGGTCTTCATTAAAAAGGTTTGTCATAAGAAGATGGCATGTTTGCGGGATCTCATAGATCATTCACTTGACAGCCTTAAAGCTCAGTCTCTATATGTTTGAAATCAAGCTGTCTATATTTTGTGATTCTATTGCCACACTAATATAAAGTGTAGCATGAGCCTATACTCTTGATTCAGTAGTTTTGATGCAATGGCAGTTTAATATATCAATAAAGTTGTGAATATTACACTT
>XM_039801687.1
aaaacacctgtggaAGCACATGTTCACATCGACAACCACACcgtgtataaaattaagttaagCCTGTTTTTGCTTAAGATATGGTCAGCATGGATGTATTGGCAACCAGGTTTTACTCATATGACAAAATGTACAGTCATGATTTACGCGAGCAAAGCTTTTCAGACTGGCCATTTAGAGAGGAATGTAACTGCACACCTGAAAAGATGGCCACGGCTGGGTTTGTCCACTGCCCCAGTGAGAATGAGCCTGatgttgctagctgtttcttcTGTCTGATCGAGCTTGAGGGCTGGGAGCCAGATGATGATCCCTGGTCTGAACACGTAAAACGCTCCCCTAACTGTGGATTCTTAAACATGCAGAAAGACTTCACCGAGCTGACTGTGGCTGAATTCTGTCATAAGGAAAGGGAGAGGCTAAAGGTCTTCATTAAAAAGGTTTGTCATAAGAAGATGGCATGTTTGCGGGATCTCATAGATCATTCACTTGACAGCCTTAAAGCTCAGTCTCTATATGTTTGAAATCAAGCTGTCTATATTTTGTGATTCTATTGCCACACTAATATAAAGTGTAGCATGAGCCTATACTCTTGATTCAGTAGTTTTGATGCAATGGCAGTTTAATATATCAATAAAGTTGTGAATATTA

Function

NR:

description
baculoviral IAP repeat-containing protein 5.1-like

GO:

id name namespace
GO:0007507 heart development biological_process
GO:0045766 positive regulation of angiogenesis biological_process
GO:0030182 neuron differentiation biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0001570 vasculogenesis biological_process
GO:0043523 regulation of neuron apoptotic process biological_process

KEGG:

id description
K08731 BIRC5; baculoviral IAP repeat-containing protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
TU69283 False 552 lncRNA 0.41 4 21717164 21720123
XM_039801687.1 True 651 mRNA 0.41 4 21717109 21720118

Neighbor

gene id symbol gene type direction distance location
c1galt1a LOC104956867 coding upstream 96908 21607339 ~ 21620201 (+)
LOC120559688 NA coding upstream 161914 21553252 ~ 21555195 (+)
slc26a10 LOC103368469 coding upstream 212189 21498706 ~ 21504920 (+)
arhgef25a LOC102292298,LOC100705949,LOC101484609 coding upstream 243735 21417136 ~ 21473374 (+)
kmt2d kmt2d coding upstream 357122 21323314 ~ 21359987 (+)
zgc:153867 LOC107390870,LOC103467339,LOC102296328,LOC104956861,LOC105928965,LOC106950810,LOC106525009,LOC101167617,LOC102221965,LOC100708807,LOC101480989 coding downstream 17357 21737480 ~ 21746717 (+)
tmem9 tmem9,LOC107707676,LOC106572715,LOC107669678 coding downstream 56348 21776471 ~ 21780950 (+)
ribc1 NA coding downstream 103395 21823518 ~ 21827890 (+)
idh3g idh3g coding downstream 302711 22022834 ~ 22028294 (+)
zgc:158263 LOC104932850,LOC104967525,LOC101474144,LOC102796628 coding downstream 390864 22110987 ~ 22119609 (+)
G51811 NA non-coding upstream 138854 21577388 ~ 21578255 (+)
G51761 LOC103385089,LOC104932540,LOC104956873 non-coding upstream 335860 21379001 ~ 21381249 (+)
G51739 NA non-coding upstream 340846 21376031 ~ 21376263 (+)
G51738 LOC104956875,LOC101062677 non-coding upstream 350079 21366676 ~ 21367030 (+)
G51737 acvr1b non-coding upstream 350532 21366301 ~ 21366577 (+)
G51900 smc1a non-coding downstream 92489 21812612 ~ 21813631 (+)
G51902 smc1a non-coding downstream 99742 21819865 ~ 21820675 (+)
LOC120559724 NA non-coding downstream 175218 21895341 ~ 21896456 (+)
G51921 huwe1 non-coding downstream 179001 21899124 ~ 21900231 (+)
G51922 huwe1 non-coding downstream 180321 21900444 ~ 21901003 (+)
G51804 NA other upstream 157760 21558890 ~ 21559349 (+)
G51734 acvr1b,LOC100709886,LOC101485924 other upstream 352679 21361290 ~ 21364430 (+)
G51716 NA other upstream 426147 21289588 ~ 21290962 (+)
LOC120559772 LOC108235180,LOC102301975,LOC103385136,LOC104941571,LOC107390930,LOC103360973,LOC101475964 other upstream 1184540 20445971 ~ 20532569 (+)
LOC120558901 LOC104941554,LOC102293999,LOC103360402 other upstream 1651374 20063992 ~ 20065735 (+)
LOC120559721 cacna1s,LOC103368470 other downstream 63094 21783217 ~ 21807914 (+)
G51926 NA other downstream 183419 21903542 ~ 21904077 (+)
avpr2aa avpr2,LOC105897269 other downstream 326640 22046763 ~ 22060645 (+)
LOC120558641 LOC103363734,LOC104967523 other downstream 370074 22090197 ~ 22094890 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other downstream 836206 22556329 ~ 22560328 (+)

Expression


Co-expression Network